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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170876071
MDTC01034214
364406
Alphaproteobacteria
GCC
Gly
>WENV170883940
MDTC01175480
365250
Alphaproteobacteria
GCC
Gly
>WENV170888786
MDTC01264155
339737
Alphaproteobacteria
GAC
Val
>WENV170877432
MDTC01057819
351461
Alphaproteobacteria
TTG
Gln
>WENV170875720
MDTC01027366
149985
Alphaproteobacteria
ACG
Arg
>WENV170877585
MDTC01060816
149985
Alphaproteobacteria
ACG
Arg
>WENV170881089
MDTC01125101
149985
Alphaproteobacteria
ACG
Arg
>WENV170885739
MDTC01207987
149985
Alphaproteobacteria
ACG
Arg
>WENV170887959
MDTC01248874
149985
Alphaproteobacteria
ACG
Arg
>WENV170889352
MDTC01273593
99726
Alphaproteobacteria
TAG
Leu
>WENV170883520
MDTC01167364
366773
Alphaproteobacteria
TTC
Glu
>WENV170878884
MDTC01085765
237489
Alphaproteobacteria
CAT
Met
>WENV170878053
MDTC01069361
267922
Alphaproteobacteria
CCA
Trp
>WENV170883918
MDTC01175239
267922
Alphaproteobacteria
CCA
Trp
>WENV170889631
MDTC01277838
267922
Alphaproteobacteria
CCA
Trp
>WENV170886537
MDTC01223131
241021
Alphaproteobacteria
GGC
Ala
>WENV170886574
MDTC01223737
66752
Alphaproteobacteria
CAG
Leu
>WENV170876305
MDTC01037895
113700
Alphaproteobacteria
>WENV170884334
MDTC01182050
113700
Alphaproteobacteria
>WENV170878551
MDTC01078940
144964
Alphaproteobacteria
TGG
Pro
>WENV170882160
MDTC01144549
23468
Alphaproteobacteria
GCT
Ser
>WENV170879070
MDTC01088764
257573
Alphaproteobacteria
GAA
Phe
>WENV170885691
MDTC01207159
257573
Alphaproteobacteria
GAA
Phe
>WENV170886134
MDTC01215242
146875
Alphaproteobacteria
GTG
His
>WENV170878204
MDTC01071963
176908
Alphaproteobacteria
GTC
Asp
>WENV170878349
MDTC01074485
282595
Alphaproteobacteria
CCA
Trp
>WENV170880112
MDTC01106652
148353
Alphaproteobacteria
CAT
Met
>WENV170882099
MDTC01143594
338282
Alphaproteobacteria
GTT
Asn
>WENV170884060
MDTC01177446
338282
Alphaproteobacteria
GTT
Asn
>WENV170883924
MDTC01175355
147083
Alphaproteobacteria
GGG
Pro
>WENV170884262
MDTC01180776
147083
Alphaproteobacteria
GGG
Pro
>WENV170886355
MDTC01220105
165860
Alphaproteobacteria
TGG
Pro
>WENV170878824
MDTC01084177
339846
Alphaproteobacteria
GAC
Val
>WENV170879850
MDTC01101890
339846
Alphaproteobacteria
GAC
Val
>WENV170887811
MDTC01246300
339454
Alphaproteobacteria
>WENV170880843
MDTC01121254
345376
Alphaproteobacteria
GAC
Val
>WENV170883684
MDTC01170470
237740
Alphaproteobacteria
TTT
Lys
>WENV170884575
MDTC01185737
249928
Alphaproteobacteria
TAC
Val
>WENV170874275
MDTC01000897
99414
Alphaproteobacteria
GTA
Tyr
>WENV170878932
MDTC01086356
27877
Alphaproteobacteria
GGA
Ser
>WENV170875731
MDTC01027549
351511
Alphaproteobacteria
TTG
Gln
>WENV170881179
MDTC01126655
151730
Alphaproteobacteria
CCG
Arg
>WENV170879400
MDTC01094040
258175
Alphaproteobacteria
CGC
Ala
>WENV170889117
MDTC01269847
23672
Alphaproteobacteria
GCT
Ser
>WENV170888654
MDTC01261522
340106
Alphaproteobacteria
GCC
Gly
>WENV170877504
MDTC01059145
167926
Alphaproteobacteria
CAT
Met
>WENV170882142
MDTC01144390
161002
Alphaproteobacteria
GTG
His
>WENV170886339
MDTC01219708
281959
Alphaproteobacteria
CGC
Ala
>WENV170882012
MDTC01141911
341164
Alphaproteobacteria
GCC
Gly
>WENV170883801
MDTC01172769
59164
Alphaproteobacteria
GAG
Leu
>WENV170885590
MDTC01205043
260015
Alphaproteobacteria
CTC
Glu
>WENV170879222
MDTC01091246
359842
Alphaproteobacteria
GAC
Val
>WENV170876273
MDTC01037472
348781
Alphaproteobacteria
GAA
Phe
>WENV170876331
MDTC01038229
348781
Alphaproteobacteria
GAA
Phe
>WENV170886463
MDTC01221861
348781
Alphaproteobacteria
GAA
Phe
>WENV170875898
MDTC01030616
412477
Alphaproteobacteria
GCA
Cys
>WENV170885210
MDTC01197940
82948
Alphaproteobacteria
CAA
Leu
>WENV170886538
MDTC01223147
82948
Alphaproteobacteria
CAA
Leu
>WENV170887405
MDTC01239562
344517
Alphaproteobacteria
GTT
Asn
>WENV170883744
MDTC01171346
370641
Alphaproteobacteria
GCC
Gly
>WENV170874835
MDTC01012044
352191
Alphaproteobacteria
GGT
Thr
>WENV170887636
MDTC01243286
187569
Alphaproteobacteria
CCG
Arg
>WENV170880132
MDTC01107170
266073
Alphaproteobacteria
TTT
Lys
>WENV170887542
MDTC01241436
266073
Alphaproteobacteria
TTT
Lys
>WENV170889073
MDTC01268947
266073
Alphaproteobacteria
TTT
Lys
>WENV170889394
MDTC01274150
266073
Alphaproteobacteria
TTT
Lys
>WENV170875662
MDTC01025811
369678
Alphaproteobacteria
GGT
Thr
>WENV170883088
MDTC01159579
152248
Alphaproteobacteria
TGG
Pro
>WENV170881926
MDTC01140111
339606
Alphaproteobacteria
>WENV170886586
MDTC01223893
412424
Alphaproteobacteria
TCC
Gly
>WENV170874855
MDTC01012406
150356
Alphaproteobacteria
GTC
Asp
>WENV170875922
MDTC01031311
150356
Alphaproteobacteria
GTC
Asp
>WENV170876643
MDTC01043856
150356
Alphaproteobacteria
GTC
Asp
>WENV170881562
MDTC01133252
150356
Alphaproteobacteria
GTC
Asp
>WENV170881666
MDTC01134867
150356
Alphaproteobacteria
GTC
Asp
>WENV170883273
MDTC01163708
150356
Alphaproteobacteria
GTC
Asp
>WENV170884385
MDTC01182949
150356
Alphaproteobacteria
GTC
Asp
>WENV170885331
MDTC01200135
150356
Alphaproteobacteria
GTC
Asp
>WENV170889354
MDTC01273593
150356
Alphaproteobacteria
GTC
Asp
>WENV170886393
MDTC01220660
23572
Alphaproteobacteria
TGA
Ser
>WENV170886702
MDTC01226398
343498
Alphaproteobacteria
GGT
Thr
>WENV170876772
MDTC01046280
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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