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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170917155
MDTE01188535
365250
Alphaproteobacteria
GCC
Gly
>WENV170906132
MDTE01034467
339737
Alphaproteobacteria
GAC
Val
>WENV170906342
MDTE01037366
339737
Alphaproteobacteria
GAC
Val
>WENV170915462
MDTE01164158
339737
Alphaproteobacteria
GAC
Val
>WENV170915722
MDTE01168107
339737
Alphaproteobacteria
GAC
Val
>WENV170912900
MDTE01127032
149985
Alphaproteobacteria
ACG
Arg
>WENV170909679
MDTE01081298
268154
Alphaproteobacteria
TGT
Thr
>WENV170908608
MDTE01067326
306070
Alphaproteobacteria
CCA
Trp
>WENV170913065
MDTE01129357
237489
Alphaproteobacteria
CAT
Met
>WENV170914446
MDTE01148652
10665
Alphaproteobacteria
GCT
Ser
>WENV170908292
MDTE01062599
257573
Alphaproteobacteria
GAA
Phe
>WENV170913369
MDTE01133582
257573
Alphaproteobacteria
GAA
Phe
>WENV170909675
MDTE01081298
146875
Alphaproteobacteria
GTG
His
>WENV170904272
MDTE01010135
339724
Alphaproteobacteria
TTG
Gln
>WENV170904352
MDTE01010952
339724
Alphaproteobacteria
TTG
Gln
>WENV170912201
MDTE01117286
339724
Alphaproteobacteria
TTG
Gln
>WENV170914868
MDTE01155086
339724
Alphaproteobacteria
TTG
Gln
>WENV170915440
MDTE01163788
339724
Alphaproteobacteria
TTG
Gln
>WENV170907355
MDTE01050868
421153
Alphaproteobacteria
>WENV170912703
MDTE01124409
421153
Alphaproteobacteria
>WENV170903604
MDTE01000532
338282
Alphaproteobacteria
GTT
Asn
>WENV170911314
MDTE01103960
338282
Alphaproteobacteria
GTT
Asn
>WENV170912527
MDTE01122064
338282
Alphaproteobacteria
GTT
Asn
>WENV170916558
MDTE01179839
147577
Alphaproteobacteria
CCG
Arg
>WENV170910354
MDTE01090830
199865
Alphaproteobacteria
CAT
Met
>WENV170916239
MDTE01175377
199865
Alphaproteobacteria
CAT
Met
>WENV170904242
MDTE01009553
95928
Alphaproteobacteria
TAG
Leu
>WENV170912688
MDTE01124210
95928
Alphaproteobacteria
TAG
Leu
>WENV170913060
MDTE01129357
31506
Alphaproteobacteria
TGA
Ser
>WENV170915070
MDTE01157777
162801
Alphaproteobacteria
GTG
His
>WENV170906966
MDTE01046116
200119
Alphaproteobacteria
CAT
Met
>WENV170911435
MDTE01105873
200119
Alphaproteobacteria
CAT
Met
>WENV170909527
MDTE01079451
357160
Alphaproteobacteria
TTC
Glu
>WENV170916371
MDTE01177147
357160
Alphaproteobacteria
TTC
Glu
>WENV170916372
MDTE01177147
357160
Alphaproteobacteria
TTC
Glu
>WENV170910044
MDTE01086179
294226
Alphaproteobacteria
>WENV170909884
MDTE01084230
417264
Alphaproteobacteria
CTG
Gln
>WENV170909951
MDTE01085170
194755
Alphaproteobacteria
CAT
Met
>WENV170909677
MDTE01081298
151733
Alphaproteobacteria
GGG
Pro
>WENV170906268
MDTE01036321
96640
Alphaproteobacteria
CAA
Leu
>WENV170907919
MDTE01058369
339725
Alphaproteobacteria
GAA
Phe
>WENV170913067
MDTE01129357
339725
Alphaproteobacteria
GAA
Phe
>WENV170917875
MDTE01198872
339725
Alphaproteobacteria
GAA
Phe
>WENV170905147
MDTE01021625
192195
Alphaproteobacteria
GTC
Asp
>WENV170906201
MDTE01035470
192195
Alphaproteobacteria
GTC
Asp
>WENV170906488
MDTE01039273
192195
Alphaproteobacteria
GTC
Asp
>WENV170907486
MDTE01052496
192195
Alphaproteobacteria
GTC
Asp
>WENV170907499
MDTE01052524
192195
Alphaproteobacteria
GTC
Asp
>WENV170914090
MDTE01143014
192195
Alphaproteobacteria
GTC
Asp
>WENV170914445
MDTE01148643
192195
Alphaproteobacteria
GTC
Asp
>WENV170915834
MDTE01169545
192195
Alphaproteobacteria
GTC
Asp
>WENV170917096
MDTE01187784
192195
Alphaproteobacteria
GTC
Asp
>WENV170909672
MDTE01081298
258175
Alphaproteobacteria
CGC
Ala
>WENV170911018
MDTE01099779
258175
Alphaproteobacteria
CGC
Ala
>WENV170916858
MDTE01184053
258175
Alphaproteobacteria
CGC
Ala
>WENV170909676
MDTE01081298
167926
Alphaproteobacteria
CAT
Met
>WENV170911315
MDTE01103983
167926
Alphaproteobacteria
CAT
Met
>WENV170915551
MDTE01165410
167926
Alphaproteobacteria
CAT
Met
>WENV170907738
MDTE01055867
254522
Alphaproteobacteria
GAA
Phe
>WENV170910420
MDTE01091807
254522
Alphaproteobacteria
GAA
Phe
>WENV170905162
MDTE01021787
289655
Alphaproteobacteria
GGC
Ala
>WENV170905496
MDTE01026089
289655
Alphaproteobacteria
GGC
Ala
>WENV170907094
MDTE01047707
289655
Alphaproteobacteria
GGC
Ala
>WENV170912521
MDTE01121957
289655
Alphaproteobacteria
GGC
Ala
>WENV170913195
MDTE01131044
359842
Alphaproteobacteria
GAC
Val
>WENV170904542
MDTE01013343
65244
Alphaproteobacteria
CAG
Leu
>WENV170906425
MDTE01038451
65244
Alphaproteobacteria
CAG
Leu
>WENV170915005
MDTE01156895
65244
Alphaproteobacteria
CAG
Leu
>WENV170913578
MDTE01136530
241518
Alphaproteobacteria
CCA
Trp
>WENV170917849
MDTE01198559
370641
Alphaproteobacteria
GCC
Gly
>WENV170916520
MDTE01179119
279830
Alphaproteobacteria
TAC
Val
>WENV170904348
MDTE01010952
412281
Alphaproteobacteria
CTG
Gln
>WENV170912575
MDTE01122795
412281
Alphaproteobacteria
CTG
Gln
>WENV170918251
MDTE01203810
412281
Alphaproteobacteria
CTG
Gln
>WENV170903554
MDTE01000198
266073
Alphaproteobacteria
TTT
Lys
>WENV170915416
MDTE01163347
266073
Alphaproteobacteria
TTT
Lys
>WENV170912254
MDTE01117891
369678
Alphaproteobacteria
GGT
Thr
>WENV170912702
MDTE01124409
369678
Alphaproteobacteria
GGT
Thr
>WENV170918136
MDTE01202421
369678
Alphaproteobacteria
GGT
Thr
>WENV170918009
MDTE01200871
29831
Alphaproteobacteria
TGA
Ser
>WENV170918086
MDTE01201698
412424
Alphaproteobacteria
TCC
Gly
>WENV170909317
MDTE01076548
150356
Alphaproteobacteria
GTC
Asp
>WENV170911671
MDTE01109575
150356
Alphaproteobacteria
GTC
Asp
>WENV170905737
MDTE01029353
147289
Alphaproteobacteria
GTC
Asp
>WENV170906188
MDTE01035270
21074
Alphaproteobacteria
GGA
Ser
>WENV170907619
MDTE01054019
21074
Alphaproteobacteria
GGA
Ser
>WENV170908492
MDTE01065280
21074
Alphaproteobacteria
GGA
Ser
>WENV170915911
MDTE01170552
377327
Alphaproteobacteria
GCC
Gly
>WENV170906557
MDTE01040365
10904
Alphaproteobacteria
GCT
Ser
>WENV170912974
MDTE01128348
10904
Alphaproteobacteria
GCT
Ser
>WENV170908060
MDTE01060113
191695
Alphaproteobacteria
CCT
Arg
>WENV170910984
MDTE01099270
191695
Alphaproteobacteria
CCT
Arg
>WENV170906998
MDTE01046519
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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