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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170919043
MDTF01005584
241021
Alphaproteobacteria
GGC
Ala
>WENV170918531
MDTF01001345
113700
Alphaproteobacteria
>WENV170919523
MDTF01009677
113700
Alphaproteobacteria
>WENV170919925
MDTF01013605
338282
Alphaproteobacteria
GTT
Asn
>WENV170919275
MDTF01007692
147083
Alphaproteobacteria
GGG
Pro
>WENV170919522
MDTF01009677
340106
Alphaproteobacteria
GCC
Gly
>WENV170919221
MDTF01007230
348781
Alphaproteobacteria
GAA
Phe
>WENV170919308
MDTF01007970
348781
Alphaproteobacteria
GAA
Phe
>WENV170919446
MDTF01008979
348781
Alphaproteobacteria
GAA
Phe
>WENV170919491
MDTF01009379
348781
Alphaproteobacteria
GAA
Phe
>WENV170920239
MDTF01016284
236256
Alphaproteobacteria
TAC
Val
>WENV170920252
MDTF01016452
343498
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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