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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170950861
MEHZ011522164
365250
Alphaproteobacteria
GCC
Gly
>WENV170951201
MEHZ011541914
149985
Alphaproteobacteria
ACG
Arg
>WENV170951285
MEHZ011545687
149985
Alphaproteobacteria
ACG
Arg
>WENV170952222
MEHZ011589149
149985
Alphaproteobacteria
ACG
Arg
>WENV170949748
MEHZ011449514
267922
Alphaproteobacteria
CCA
Trp
>WENV170949846
MEHZ011457534
267922
Alphaproteobacteria
CCA
Trp
>WENV170950278
MEHZ011488068
267922
Alphaproteobacteria
CCA
Trp
>WENV170948910
MEHZ011310333
241021
Alphaproteobacteria
GGC
Ala
>WENV170950194
MEHZ011483074
241021
Alphaproteobacteria
GGC
Ala
>WENV170950250
MEHZ011486622
241021
Alphaproteobacteria
GGC
Ala
>WENV170950269
MEHZ011487934
241021
Alphaproteobacteria
GGC
Ala
>WENV170953035
MEHZ011625681
241021
Alphaproteobacteria
GGC
Ala
>WENV170948794
MEHZ011283105
113700
Alphaproteobacteria
>WENV170950806
MEHZ011518789
113700
Alphaproteobacteria
>WENV170949928
MEHZ011464991
114627
Alphaproteobacteria
>WENV170948745
MEHZ011273391
176908
Alphaproteobacteria
GTC
Asp
>WENV170952090
MEHZ011582606
256971
Alphaproteobacteria
TGT
Thr
>WENV170948096
MEHZ011081516
338282
Alphaproteobacteria
GTT
Asn
>WENV170950069
MEHZ011474678
338282
Alphaproteobacteria
GTT
Asn
>WENV170950288
MEHZ011488500
338282
Alphaproteobacteria
GTT
Asn
>WENV170950988
MEHZ011530558
338282
Alphaproteobacteria
GTT
Asn
>WENV170951075
MEHZ011535473
338282
Alphaproteobacteria
GTT
Asn
>WENV170951591
MEHZ011560484
338282
Alphaproteobacteria
GTT
Asn
>WENV170952436
MEHZ011597641
338282
Alphaproteobacteria
GTT
Asn
>WENV170952589
MEHZ011605564
338282
Alphaproteobacteria
GTT
Asn
>WENV170950007
MEHZ011470274
147083
Alphaproteobacteria
GGG
Pro
>WENV170950259
MEHZ011487533
147083
Alphaproteobacteria
GGG
Pro
>WENV170951499
MEHZ011556625
147083
Alphaproteobacteria
GGG
Pro
>WENV170950828
MEHZ011520489
147879
Alphaproteobacteria
TGG
Pro
>WENV170950920
MEHZ011527453
147879
Alphaproteobacteria
TGG
Pro
>WENV170951028
MEHZ011532449
147879
Alphaproteobacteria
TGG
Pro
>WENV170951165
MEHZ011539696
147879
Alphaproteobacteria
TGG
Pro
>WENV170952926
MEHZ011621059
147879
Alphaproteobacteria
TGG
Pro
>WENV170949887
MEHZ011462150
147334
Alphaproteobacteria
CAT
Met
>WENV170949861
MEHZ011459596
249928
Alphaproteobacteria
TAC
Val
>WENV170952654
MEHZ011608602
249928
Alphaproteobacteria
TAC
Val
>WENV170949746
MEHZ011449183
281594
Alphaproteobacteria
TGT
Thr
>WENV170949812
MEHZ011455770
281594
Alphaproteobacteria
TGT
Thr
>WENV170950489
MEHZ011499418
281594
Alphaproteobacteria
TGT
Thr
>WENV170950539
MEHZ011502511
281594
Alphaproteobacteria
TGT
Thr
>WENV170950732
MEHZ011514327
281594
Alphaproteobacteria
TGT
Thr
>WENV170951044
MEHZ011532990
281594
Alphaproteobacteria
TGT
Thr
>WENV170951218
MEHZ011542906
281594
Alphaproteobacteria
TGT
Thr
>WENV170951314
MEHZ011547730
281594
Alphaproteobacteria
TGT
Thr
>WENV170950220
MEHZ011484329
159395
Alphaproteobacteria
GTC
Asp
>WENV170950771
MEHZ011516752
159395
Alphaproteobacteria
GTC
Asp
>WENV170952862
MEHZ011618522
159395
Alphaproteobacteria
GTC
Asp
>WENV170953152
MEHZ011631228
159395
Alphaproteobacteria
GTC
Asp
>WENV170948402
MEHZ011182856
28682
Alphaproteobacteria
GGA
Ser
>WENV170951631
MEHZ011561764
28682
Alphaproteobacteria
GGA
Ser
>WENV170950481
MEHZ011499007
192195
Alphaproteobacteria
GTC
Asp
>WENV170949301
MEHZ011398343
252148
Alphaproteobacteria
TGT
Thr
>WENV170947703
MEHZ010887414
342876
Alphaproteobacteria
GAC
Val
>WENV170948516
MEHZ011214943
23672
Alphaproteobacteria
GCT
Ser
>WENV170949845
MEHZ011457534
340106
Alphaproteobacteria
GCC
Gly
>WENV170950062
MEHZ011473932
340106
Alphaproteobacteria
GCC
Gly
>WENV170950272
MEHZ011487992
340106
Alphaproteobacteria
GCC
Gly
>WENV170950450
MEHZ011497656
340106
Alphaproteobacteria
GCC
Gly
>WENV170951103
MEHZ011536671
340106
Alphaproteobacteria
GCC
Gly
>WENV170947670
MEHZ010855112
161002
Alphaproteobacteria
GTG
His
>WENV170953711
MEHZ011660424
148083
Alphaproteobacteria
ACG
Arg
>WENV170950122
MEHZ011478643
147877
Alphaproteobacteria
GTG
His
>WENV170948120
MEHZ011088696
359842
Alphaproteobacteria
GAC
Val
>WENV170952165
MEHZ011586677
280207
Alphaproteobacteria
TGC
Ala
>WENV170947980
MEHZ011025083
348781
Alphaproteobacteria
GAA
Phe
>WENV170948878
MEHZ011301040
163860
Alphaproteobacteria
GGG
Pro
>WENV170951243
MEHZ011544268
344517
Alphaproteobacteria
GTT
Asn
>WENV170948168
MEHZ011101123
370641
Alphaproteobacteria
GCC
Gly
>WENV170953457
MEHZ011646510
187569
Alphaproteobacteria
CCG
Arg
>WENV170948489
MEHZ011210868
338287
Alphaproteobacteria
GGT
Thr
>WENV170952949
MEHZ011622267
412424
Alphaproteobacteria
TCC
Gly
>WENV170949131
MEHZ011364740
113715
Alphaproteobacteria
TAG
Leu
>WENV170951960
MEHZ011578050
150356
Alphaproteobacteria
GTC
Asp
>WENV170952971
MEHZ011623005
150356
Alphaproteobacteria
GTC
Asp
>WENV170953901
MEHZ011673292
180581
Alphaproteobacteria
TGG
Pro
>WENV170949950
MEHZ011466321
236256
Alphaproteobacteria
TAC
Val
>WENV170951738
MEHZ011567198
236256
Alphaproteobacteria
TAC
Val
>WENV170947736
MEHZ010908848
191695
Alphaproteobacteria
CCT
Arg
>WENV170947775
MEHZ010929434
191695
Alphaproteobacteria
CCT
Arg
>WENV170949687
MEHZ011444837
193837
Alphaproteobacteria
CAT
Met
>WENV170951625
MEHZ011561716
193837
Alphaproteobacteria
CAT
Met
>WENV170953026
MEHZ011625274
193837
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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