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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170961287
MKWU01108858
411593
Gammaproteobacteria
CCC
Gly
>WENV170958124
MKWU01000544
115067
Gammaproteobacteria
GTA
Tyr
>WENV170959297
MKWU01004037
236013
Gammaproteobacteria
TGC
Ala
>WENV170960559
MKWU01036424
108171
Gammaproteobacteria
GTA
Tyr
>WENV170960782
MKWU01052983
108171
Gammaproteobacteria
GTA
Tyr
>WENV170960961
MKWU01068945
412505
Gammaproteobacteria
GCA
Cys
>WENV170958379
MKWU01000949
174801
Gammaproteobacteria
TGG
Pro
>WENV170958219
MKWU01000639
245841
Gammaproteobacteria
GAA
Phe
>WENV170959002
MKWU01002645
52727
Gammaproteobacteria
GGA
Ser
>WENV170959049
MKWU01002817
52727
Gammaproteobacteria
GGA
Ser
>WENV170960364
MKWU01025676
270849
Gammaproteobacteria
TTC
Glu
>WENV170959257
MKWU01003782
95750
Gammaproteobacteria
TAG
Leu
>WENV170958129
MKWU01000544
239650
Gammaproteobacteria
TGT
Thr
>WENV170958584
MKWU01001415
252289
Gammaproteobacteria
TTT
Lys
>WENV170960557
MKWU01036398
152301
Gammaproteobacteria
GAT
Ile
>WENV170959420
MKWU01004941
279824
Gammaproteobacteria
>WENV170958128
MKWU01000544
311863
Gammaproteobacteria
GGC
Ala
>WENV170957772
MKWU01000168
154796
Gammaproteobacteria
TCT
Arg
>WENV170960099
MKWU01016042
195303
Gammaproteobacteria
GAT
Ile
>WENV170960130
MKWU01016779
195303
Gammaproteobacteria
GAT
Ile
>WENV170960166
MKWU01017744
63563
Gammaproteobacteria
CAG
Leu
>WENV170958127
MKWU01000544
247088
Gammaproteobacteria
CCA
Trp
>WENV170957771
MKWU01000168
198797
Gammaproteobacteria
TGG
Pro
>WENV170961196
MKWU01093852
45152
Gammaproteobacteria
GGA
Ser
>WENV170960465
MKWU01030658
147050
Gammaproteobacteria
GAT
Ile
>WENV170961173
MKWU01091011
147050
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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