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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170961449
MLJW01000045
235844
Alphaproteobacteria
CGC
Ala
>WENV170961603
MLJW01000214
146580
Alphaproteobacteria
GGG
Pro
>WENV170961789
MLJW01001310
152445
Alphaproteobacteria
GAT
Ile
>WENV170961841
MLJW01002459
166353
Alphaproteobacteria
ACG
Arg
>WENV170961853
MLJW01002616
242540
Alphaproteobacteria
TGC
Ala
>WENV170961860
MLJW01002990
130084
Alphaproteobacteria
GGG
Pro
>WENV170961866
MLJW01003220
4669
Alphaproteobacteria
GCT
Ser
>WENV170961871
MLJW01003415
23611
Alphaproteobacteria
CGA
Ser
>WENV170961874
MLJW01003752
185506
Alphaproteobacteria
CAT
Met
>WENV170961883
MLJW01004477
59118
Alphaproteobacteria
CAG
Leu
>WENV170961889
MLJW01004705
146626
Alphaproteobacteria
GTG
His
>WENV170961891
MLJW01005144
412154
Alphaproteobacteria
GCA
Cys
>WENV170961908
MLJW01006004
259072
Alphaproteobacteria
CGC
Ala
>WENV170961912
MLJW01006167
237479
Alphaproteobacteria
TTT
Lys
>WENV170961919
MLJW01006852
148429
Alphaproteobacteria
CCT
Arg
>WENV170961920
MLJW01006887
338750
Alphaproteobacteria
GAC
Val
>WENV170961932
MLJW01008018
340310
Alphaproteobacteria
CAC
Val
>WENV170961933
MLJW01008263
338283
Alphaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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