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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170961465
MLJW01000057
239009
Betaproteobacteria
TAC
Val
>WENV170961583
MLJW01000182
339413
Betaproteobacteria
GGT
Thr
>WENV170961335
MLJW01000008
239252
Betaproteobacteria
TTT
Lys
>WENV170961376
MLJW01000020
239252
Betaproteobacteria
TTT
Lys
>WENV170961451
MLJW01000047
239252
Betaproteobacteria
TTT
Lys
>WENV170961875
MLJW01003761
145694
Betaproteobacteria
ACG
Arg
>WENV170961846
MLJW01002549
154789
Betaproteobacteria
CAT
Met
>WENV170961879
MLJW01004322
251517
Betaproteobacteria
TGT
Thr
>WENV170961334
MLJW01000008
146768
Betaproteobacteria
CAT
Met
>WENV170961450
MLJW01000047
146768
Betaproteobacteria
CAT
Met
>WENV170961486
MLJW01000077
146768
Betaproteobacteria
CAT
Met
>WENV170961384
MLJW01000021
173491
Betaproteobacteria
TCT
Arg
>WENV170961403
MLJW01000026
173491
Betaproteobacteria
TCT
Arg
>WENV170961561
MLJW01000152
173491
Betaproteobacteria
TCT
Arg
>WENV170961589
MLJW01000192
173491
Betaproteobacteria
TCT
Arg
>WENV170961746
MLJW01000844
307571
Betaproteobacteria
CGC
Ala
>WENV170961749
MLJW01000875
20037
Betaproteobacteria
CGA
Ser
>WENV170961635
MLJW01000269
147332
Betaproteobacteria
CAT
Met
>WENV170961759
MLJW01001005
145695
Betaproteobacteria
GGG
Pro
>WENV170961877
MLJW01004181
145695
Betaproteobacteria
GGG
Pro
>WENV170961568
MLJW01000169
4627
Betaproteobacteria
GCT
Ser
>WENV170961680
MLJW01000485
4627
Betaproteobacteria
GCT
Ser
>WENV170961624
MLJW01000251
313750
Betaproteobacteria
TAC
Val
>WENV170961626
MLJW01000253
313750
Betaproteobacteria
TAC
Val
>WENV170961760
MLJW01001019
17753
Betaproteobacteria
CGA
Ser
>WENV170961873
MLJW01003435
238386
Betaproteobacteria
CTT
Lys
>WENV170961858
MLJW01002873
339485
Betaproteobacteria
CAC
Val
>WENV170961666
MLJW01000403
153173
Betaproteobacteria
CAT
Met
>WENV170961918
MLJW01006799
162621
Betaproteobacteria
TTG
Gln
>WENV170961726
MLJW01000698
147666
Betaproteobacteria
CAT
Met
>WENV170961526
MLJW01000110
148282
Betaproteobacteria
TGG
Pro
>WENV170961610
MLJW01000232
148282
Betaproteobacteria
TGG
Pro
>WENV170961527
MLJW01000111
246006
Betaproteobacteria
TTT
Lys
>WENV170961872
MLJW01003435
246006
Betaproteobacteria
TTT
Lys
>WENV170961391
MLJW01000022
72012
Betaproteobacteria
CAG
Leu
>WENV170961406
MLJW01000026
72012
Betaproteobacteria
CAG
Leu
>WENV170961318
MLJW01000004
304536
Betaproteobacteria
TGT
Thr
>WENV170961456
MLJW01000054
304536
Betaproteobacteria
TGT
Thr
>WENV170961388
MLJW01000021
238002
Betaproteobacteria
GCC
Gly
>WENV170961509
MLJW01000100
238002
Betaproteobacteria
GCC
Gly
>WENV170961671
MLJW01000417
238002
Betaproteobacteria
GCC
Gly
>WENV170961646
MLJW01000325
95723
Betaproteobacteria
CAG
Leu
>WENV170961745
MLJW01000840
389979
Betaproteobacteria
CCT
Arg
>WENV170961457
MLJW01000054
95620
Betaproteobacteria
GTA
Tyr
>WENV170961893
MLJW01005253
95620
Betaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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