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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180065719
MPLY02082537
236366
Gammaproteobacteria
GTG
His
>WENV180064736
MPLY02018633
95590
Gammaproteobacteria
>WENV180064823
MPLY02024748
95590
Gammaproteobacteria
>WENV180067024
MPLY02171965
95590
Gammaproteobacteria
>WENV180066500
MPLY02134705
95750
Gammaproteobacteria
TAG
Leu
>WENV180067242
MPLY02188788
95750
Gammaproteobacteria
TAG
Leu
>WENV180065775
MPLY02086559
152301
Gammaproteobacteria
GAT
Ile
>WENV180064692
MPLY02016019
150587
Gammaproteobacteria
CAT
Met
>WENV180066882
MPLY02161739
150587
Gammaproteobacteria
CAT
Met
>WENV180065889
MPLY02094455
247974
Gammaproteobacteria
CCA
Trp
>WENV180066099
MPLY02108224
247974
Gammaproteobacteria
CCA
Trp
>WENV180066601
MPLY02143221
247974
Gammaproteobacteria
CCA
Trp
>WENV180065716
MPLY02082334
145713
Gammaproteobacteria
CAT
Met
>WENV180066360
MPLY02125715
411842
Gammaproteobacteria
GCA
Cys
>WENV180064800
MPLY02022889
250885
Gammaproteobacteria
TGC
Ala
>WENV180064727
MPLY02018391
59460
Gammaproteobacteria
CAA
Leu
>WENV180066328
MPLY02124283
128930
Gammaproteobacteria
GTC
Asp
>WENV180064926
MPLY02031366
243485
Gammaproteobacteria
TGT
Thr
>WENV180066177
MPLY02114127
157977
Gammaproteobacteria
TGG
Pro
>WENV180067111
MPLY02179924
157977
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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