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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180076135
MPMA02260081
313881
Gammaproteobacteria
GGC
Ala
>WENV180072177
MPMA02005357
248041
Gammaproteobacteria
GGC
Ala
>WENV180074340
MPMA02137765
236366
Gammaproteobacteria
GTG
His
>WENV180075556
MPMA02217678
236366
Gammaproteobacteria
GTG
His
>WENV180076140
MPMA02260299
236366
Gammaproteobacteria
GTG
His
>WENV180072566
MPMA02027657
95750
Gammaproteobacteria
TAG
Leu
>WENV180076291
MPMA02271907
95750
Gammaproteobacteria
TAG
Leu
>WENV180073038
MPMA02056823
150587
Gammaproteobacteria
CAT
Met
>WENV180075640
MPMA02223357
150587
Gammaproteobacteria
CAT
Met
>WENV180075656
MPMA02224415
150587
Gammaproteobacteria
CAT
Met
>WENV180075565
MPMA02218237
247974
Gammaproteobacteria
CCA
Trp
>WENV180073789
MPMA02100706
173040
Gammaproteobacteria
GAC
Val
>WENV180072087
MPMA02000320
411842
Gammaproteobacteria
GCA
Cys
>WENV180074622
MPMA02155566
411842
Gammaproteobacteria
GCA
Cys
>WENV180075739
MPMA02230339
411842
Gammaproteobacteria
GCA
Cys
>WENV180075626
MPMA02222332
428943
Gammaproteobacteria
>WENV180072317
MPMA02013547
148452
Gammaproteobacteria
CCT
Arg
>WENV180072514
MPMA02024660
195303
Gammaproteobacteria
GAT
Ile
>WENV180073024
MPMA02055832
195303
Gammaproteobacteria
GAT
Ile
>WENV180074301
MPMA02135136
195303
Gammaproteobacteria
GAT
Ile
>WENV180072553
MPMA02026950
128930
Gammaproteobacteria
GTC
Asp
>WENV180074482
MPMA02146566
128930
Gammaproteobacteria
GTC
Asp
>WENV180073099
MPMA02061000
243485
Gammaproteobacteria
TGT
Thr
>WENV180075049
MPMA02184712
198797
Gammaproteobacteria
TGG
Pro
>WENV180072086
MPMA02000320
270352
Gammaproteobacteria
GCC
Gly
>WENV180074621
MPMA02155566
270352
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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