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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180078225
MPMB02093339
351511
Alphaproteobacteria
TTG
Gln
>WENV180076790
MPMB02015137
350547
Alphaproteobacteria
GCC
Gly
>WENV180077474
MPMB02051275
167926
Alphaproteobacteria
CAT
Met
>WENV180078371
MPMB02101390
167926
Alphaproteobacteria
CAT
Met
>WENV180078999
MPMB02137550
167926
Alphaproteobacteria
CAT
Met
>WENV180077094
MPMB02029705
260015
Alphaproteobacteria
CTC
Glu
>WENV180078115
MPMB02086299
260015
Alphaproteobacteria
CTC
Glu
>WENV180078808
MPMB02127382
260015
Alphaproteobacteria
CTC
Glu
>WENV180079334
MPMB02154879
260015
Alphaproteobacteria
CTC
Glu
>WENV180079736
MPMB02180796
280207
Alphaproteobacteria
TGC
Ala
>WENV180076698
MPMB02010487
150356
Alphaproteobacteria
GTC
Asp
>WENV180079071
MPMB02141116
150356
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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