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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180076532
MPMB02002128
95590
Gammaproteobacteria
>WENV180076546
MPMB02002787
236366
Gammaproteobacteria
GTG
His
>WENV180076635
MPMB02007282
236366
Gammaproteobacteria
GTG
His
>WENV180076956
MPMB02023041
150587
Gammaproteobacteria
CAT
Met
>WENV180077171
MPMB02034771
411842
Gammaproteobacteria
GCA
Cys
>WENV180077170
MPMB02034771
270352
Gammaproteobacteria
GCC
Gly
>WENV180077196
MPMB02035533
173040
Gammaproteobacteria
GAC
Val
>WENV180077254
MPMB02038542
247974
Gammaproteobacteria
CCA
Trp
>WENV180077610
MPMB02060161
411842
Gammaproteobacteria
GCA
Cys
>WENV180077609
MPMB02060161
270352
Gammaproteobacteria
GCC
Gly
>WENV180077700
MPMB02064614
248041
Gammaproteobacteria
GGC
Ala
>WENV180077987
MPMB02078248
150587
Gammaproteobacteria
CAT
Met
>WENV180078147
MPMB02087574
236366
Gammaproteobacteria
GTG
His
>WENV180078621
MPMB02115960
128930
Gammaproteobacteria
GTC
Asp
>WENV180078753
MPMB02124221
247974
Gammaproteobacteria
CCA
Trp
>WENV180078893
MPMB02132233
95750
Gammaproteobacteria
TAG
Leu
>WENV180079039
MPMB02139508
148452
Gammaproteobacteria
CCT
Arg
>WENV180079146
MPMB02145307
150587
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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