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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180080672
MPMC02041832
182320
Gammaproteobacteria
CAT
Met
>WENV180081284
MPMC02101743
309243
Gammaproteobacteria
GTT
Asn
>WENV180081285
MPMC02101743
309243
Gammaproteobacteria
GTT
Asn
>WENV180081318
MPMC02105224
202944
Gammaproteobacteria
TGG
Pro
>WENV180081344
MPMC02108402
175987
Gammaproteobacteria
CGG
Pro
>WENV180081371
MPMC02111595
128930
Gammaproteobacteria
GTC
Asp
>WENV180081549
MPMC02125746
163492
Gammaproteobacteria
TGG
Pro
>WENV180081829
MPMC02155316
95603
Gammaproteobacteria
TAG
Leu
>WENV180081831
MPMC02155316
95603
Gammaproteobacteria
TAG
Leu
>WENV180082806
MPMC02260510
195303
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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