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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180085254
MPMD02300121
145761
Cyanobacteriota
GTC
Asp
>WENV180086022
MPMD02409307
339686
Cyanobacteriota
TAC
Val
>WENV180084342
MPMD02176225
338782
Cyanobacteriota
GTT
Asn
>WENV180085409
MPMD02321439
338782
Cyanobacteriota
GTT
Asn
>WENV180083829
MPMD02115040
237899
Cyanobacteriota
CCA
Trp
>WENV180085935
MPMD02394358
153717
Cyanobacteriota
CAT
Met
>WENV180086310
MPMD02452434
148812
Cyanobacteriota
CGG
Pro
>WENV180084359
MPMD02178622
153480
Cyanobacteriota
CAT
Met
>WENV180085897
MPMD02387514
147238
Cyanobacteriota
CCG
Arg
>WENV180086442
MPMD02469671
147238
Cyanobacteriota
CCG
Arg
>WENV180083002
MPMD02002251
153271
Cyanobacteriota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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