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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180083987
MPMD02132298
340011
Gammaproteobacteria
TTG
Gln
>WENV180084348
MPMD02177790
153475
Gammaproteobacteria
ACG
Arg
>WENV180083216
MPMD02026447
238438
Gammaproteobacteria
>WENV180083377
MPMD02050422
95590
Gammaproteobacteria
>WENV180086463
MPMD02472209
95590
Gammaproteobacteria
>WENV180085153
MPMD02288673
95750
Gammaproteobacteria
TAG
Leu
>WENV180086005
MPMD02408142
95750
Gammaproteobacteria
TAG
Leu
>WENV180086387
MPMD02462536
95750
Gammaproteobacteria
TAG
Leu
>WENV180086347
MPMD02457359
152301
Gammaproteobacteria
GAT
Ile
>WENV180086640
MPMD02496755
152301
Gammaproteobacteria
GAT
Ile
>WENV180084942
MPMD02261254
150587
Gammaproteobacteria
CAT
Met
>WENV180085864
MPMD02382973
237412
Gammaproteobacteria
TAC
Val
>WENV180084989
MPMD02268765
148440
Gammaproteobacteria
>WENV180085201
MPMD02295237
243485
Gammaproteobacteria
TGT
Thr
>WENV180085679
MPMD02357819
147981
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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