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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170962345
MRWF01012709
146757
Alphaproteobacteria
GTG
His
>WENV170961993
MRWF01001367
59361
Alphaproteobacteria
GAG
Leu
>WENV170962070
MRWF01004863
147089
Alphaproteobacteria
ACG
Arg
>WENV170962673
MRWF01023240
147089
Alphaproteobacteria
ACG
Arg
>WENV170962953
MRWF01031332
147089
Alphaproteobacteria
ACG
Arg
>WENV170962233
MRWF01009891
25586
Alphaproteobacteria
TGA
Ser
>WENV170962221
MRWF01009190
113700
Alphaproteobacteria
>WENV170962854
MRWF01028581
159305
Alphaproteobacteria
GTC
Asp
>WENV170962855
MRWF01028581
159305
Alphaproteobacteria
GTC
Asp
>WENV170962823
MRWF01027957
23468
Alphaproteobacteria
GCT
Ser
>WENV170962389
MRWF01014589
238045
Alphaproteobacteria
TTC
Glu
>WENV170962543
MRWF01020006
238045
Alphaproteobacteria
TTC
Glu
>WENV170962988
MRWF01032067
238045
Alphaproteobacteria
TTC
Glu
>WENV170962946
MRWF01031326
282595
Alphaproteobacteria
CCA
Trp
>WENV170962005
MRWF01001990
239119
Alphaproteobacteria
CGT
Thr
>WENV170962245
MRWF01010018
165266
Alphaproteobacteria
CAT
Met
>WENV170962321
MRWF01012069
165266
Alphaproteobacteria
CAT
Met
>WENV170962138
MRWF01007102
338282
Alphaproteobacteria
GTT
Asn
>WENV170962139
MRWF01007102
338282
Alphaproteobacteria
GTT
Asn
>WENV170962739
MRWF01025267
147083
Alphaproteobacteria
GGG
Pro
>WENV170962209
MRWF01009185
147577
Alphaproteobacteria
CCG
Arg
>WENV170962720
MRWF01024650
254188
Alphaproteobacteria
CCA
Trp
>WENV170962076
MRWF01005190
339846
Alphaproteobacteria
GAC
Val
>WENV170962218
MRWF01009190
340288
Alphaproteobacteria
GCC
Gly
>WENV170962219
MRWF01009190
340288
Alphaproteobacteria
GCC
Gly
>WENV170962220
MRWF01009190
340288
Alphaproteobacteria
GCC
Gly
>WENV170962495
MRWF01018128
148157
Alphaproteobacteria
CCG
Arg
>WENV170962334
MRWF01012462
147879
Alphaproteobacteria
TGG
Pro
>WENV170962797
MRWF01027302
147879
Alphaproteobacteria
TGG
Pro
>WENV170962041
MRWF01003800
345376
Alphaproteobacteria
GAC
Val
>WENV170962189
MRWF01008087
345376
Alphaproteobacteria
GAC
Val
>WENV170962687
MRWF01023958
345376
Alphaproteobacteria
GAC
Val
>WENV170962709
MRWF01024495
419996
Alphaproteobacteria
GCA
Cys
>WENV170962159
MRWF01007750
237740
Alphaproteobacteria
TTT
Lys
>WENV170962689
MRWF01023974
237740
Alphaproteobacteria
TTT
Lys
>WENV170962430
MRWF01015659
148300
Alphaproteobacteria
CCA
Trp
>WENV170962891
MRWF01029631
352395
Alphaproteobacteria
CAC
Val
>WENV170962410
MRWF01014988
99414
Alphaproteobacteria
GTA
Tyr
>WENV170962699
MRWF01023992
99414
Alphaproteobacteria
GTA
Tyr
>WENV170962222
MRWF01009190
281594
Alphaproteobacteria
TGT
Thr
>WENV170962654
MRWF01022698
281594
Alphaproteobacteria
TGT
Thr
>WENV170962835
MRWF01028246
281594
Alphaproteobacteria
TGT
Thr
>WENV170962648
MRWF01022524
175748
Alphaproteobacteria
CAT
Met
>WENV170962859
MRWF01028584
147361
Alphaproteobacteria
GGG
Pro
>WENV170962120
MRWF01006507
23650
Alphaproteobacteria
TGA
Ser
>WENV170962246
MRWF01010182
339750
Alphaproteobacteria
GGT
Thr
>WENV170962632
MRWF01022294
339750
Alphaproteobacteria
GGT
Thr
>WENV170962877
MRWF01029236
339750
Alphaproteobacteria
GGT
Thr
>WENV170962095
MRWF01005866
350547
Alphaproteobacteria
GCC
Gly
>WENV170962548
MRWF01020180
350547
Alphaproteobacteria
GCC
Gly
>WENV170962033
MRWF01003245
81007
Alphaproteobacteria
TAA
Leu
>WENV170962968
MRWF01031764
340106
Alphaproteobacteria
GCC
Gly
>WENV170962593
MRWF01021153
161002
Alphaproteobacteria
GTG
His
>WENV170962012
MRWF01002060
29390
Alphaproteobacteria
CGA
Ser
>WENV170962801
MRWF01027307
29390
Alphaproteobacteria
CGA
Ser
>WENV170962719
MRWF01024630
254522
Alphaproteobacteria
GAA
Phe
>WENV170962064
MRWF01004600
341164
Alphaproteobacteria
GCC
Gly
>WENV170962597
MRWF01021181
237281
Alphaproteobacteria
CGT
Thr
>WENV170962359
MRWF01013436
27479
Alphaproteobacteria
CGA
Ser
>WENV170962536
MRWF01019435
27479
Alphaproteobacteria
CGA
Ser
>WENV170962537
MRWF01019923
59164
Alphaproteobacteria
GAG
Leu
>WENV170962970
MRWF01031865
242540
Alphaproteobacteria
TGC
Ala
>WENV170962798
MRWF01027302
23648
Alphaproteobacteria
CGA
Ser
>WENV170962909
MRWF01030208
359842
Alphaproteobacteria
GAC
Val
>WENV170962344
MRWF01012709
148425
Alphaproteobacteria
ACG
Arg
>WENV170962417
MRWF01015375
148425
Alphaproteobacteria
ACG
Arg
>WENV170962533
MRWF01019435
280207
Alphaproteobacteria
TGC
Ala
>WENV170962799
MRWF01027302
147085
Alphaproteobacteria
CCG
Arg
>WENV170962230
MRWF01009747
255822
Alphaproteobacteria
CGT
Thr
>WENV170962316
MRWF01011701
361238
Alphaproteobacteria
GCC
Gly
>WENV170962740
MRWF01025270
354623
Alphaproteobacteria
GAC
Val
>WENV170962137
MRWF01007102
238608
Alphaproteobacteria
CAT
Met
>WENV170962952
MRWF01031332
338760
Alphaproteobacteria
GAA
Phe
>WENV170962523
MRWF01019326
97821
Alphaproteobacteria
GTA
Tyr
>WENV170962717
MRWF01024622
270451
Alphaproteobacteria
CGT
Thr
>WENV170962262
MRWF01010644
24994
Alphaproteobacteria
GGA
Ser
>WENV170961947
MRWF01000006
352191
Alphaproteobacteria
GGT
Thr
>WENV170962734
MRWF01025265
349650
Alphaproteobacteria
CAC
Val
>WENV170962239
MRWF01009914
339639
Alphaproteobacteria
TTG
Gln
>WENV170961995
MRWF01001369
339606
Alphaproteobacteria
>WENV170961996
MRWF01001369
339606
Alphaproteobacteria
>WENV170962954
MRWF01031332
339609
Alphaproteobacteria
GGT
Thr
>WENV170962401
MRWF01014803
146753
Alphaproteobacteria
GAT
Ile
>WENV170962404
MRWF01014803
146753
Alphaproteobacteria
GAT
Ile
>WENV170962534
MRWF01019435
146753
Alphaproteobacteria
GAT
Ile
>WENV170962343
MRWF01012708
412424
Alphaproteobacteria
TCC
Gly
>WENV170962173
MRWF01007840
150356
Alphaproteobacteria
GTC
Asp
>WENV170962214
MRWF01009188
150356
Alphaproteobacteria
GTC
Asp
>WENV170962217
MRWF01009189
150356
Alphaproteobacteria
GTC
Asp
>WENV170962540
MRWF01019926
150356
Alphaproteobacteria
GTC
Asp
>WENV170961989
MRWF01001184
236045
Alphaproteobacteria
CGT
Thr
>WENV170962057
MRWF01004539
236045
Alphaproteobacteria
CGT
Thr
>WENV170962735
MRWF01025265
236256
Alphaproteobacteria
TAC
Val
>WENV170962690
MRWF01023974
147088
Alphaproteobacteria
CCT
Arg
>WENV170962820
MRWF01027781
96061
Alphaproteobacteria
CAA
Leu
>WENV170962967
MRWF01031727
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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