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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965602
MTEU01004724
172608
Betaproteobacteria
TTG
Gln
>WENV170965481
MTEU01003088
60320
Betaproteobacteria
TAA
Leu
>WENV170965377
MTEU01001602
146751
Betaproteobacteria
TGG
Pro
>WENV170965656
MTEU01005530
95890
Betaproteobacteria
CAA
Leu
>WENV170965628
MTEU01005103
291819
Betaproteobacteria
TGT
Thr
>WENV170965380
MTEU01001666
147017
Betaproteobacteria
GAT
Ile
>WENV170965270
MTEU01000129
387094
Betaproteobacteria
GGT
Thr
>WENV170965400
MTEU01002032
243370
Betaproteobacteria
CGT
Thr
>WENV170965540
MTEU01003953
72012
Betaproteobacteria
CAG
Leu
>WENV170965621
MTEU01004989
72012
Betaproteobacteria
CAG
Leu
>WENV170965553
MTEU01004114
4907
Betaproteobacteria
GCT
Ser
>WENV170965524
MTEU01003630
6969
Betaproteobacteria
GCT
Ser
>WENV170965594
MTEU01004414
389979
Betaproteobacteria
CCT
Arg
>WENV170965378
MTEU01001602
146760
Betaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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