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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170965552
MTEU01004083
23711
Gammaproteobacteria
GGA
Ser
>WENV170965639
MTEU01005187
199984
Gammaproteobacteria
CAT
Met
>WENV170965633
MTEU01005137
412083
Gammaproteobacteria
CCC
Gly
>WENV170965296
MTEU01000364
235516
Gammaproteobacteria
GTG
His
>WENV170965350
MTEU01000978
235516
Gammaproteobacteria
GTG
His
>WENV170965511
MTEU01003484
190805
Gammaproteobacteria
CCG
Arg
>WENV170965632
MTEU01005108
45109
Gammaproteobacteria
GGA
Ser
>WENV170965630
MTEU01005108
301997
Gammaproteobacteria
TTC
Glu
>WENV170965280
MTEU01000270
144979
Gammaproteobacteria
CGG
Pro
>WENV170965386
MTEU01001809
144979
Gammaproteobacteria
CGG
Pro
>WENV170965591
MTEU01004295
195519
Gammaproteobacteria
CAT
Met
>WENV170965664
MTEU01005639
195519
Gammaproteobacteria
CAT
Met
>WENV170965445
MTEU01002590
51143
Gammaproteobacteria
TGA
Ser
>WENV170965505
MTEU01003430
44886
Gammaproteobacteria
TGA
Ser
>WENV170965513
MTEU01003525
16446
Gammaproteobacteria
GCT
Ser
>WENV170965266
MTEU01000088
279806
Gammaproteobacteria
TGT
Thr
>WENV170965559
MTEU01004189
144982
Gammaproteobacteria
TGG
Pro
>WENV170965661
MTEU01005582
144982
Gammaproteobacteria
TGG
Pro
>WENV170965477
MTEU01003078
202944
Gammaproteobacteria
TGG
Pro
>WENV170965352
MTEU01001027
95635
Gammaproteobacteria
CAA
Leu
>WENV170965625
MTEU01005033
95635
Gammaproteobacteria
CAA
Leu
>WENV170965457
MTEU01002665
235512
Gammaproteobacteria
GGT
Thr
>WENV170965453
MTEU01002623
62501
Gammaproteobacteria
CAG
Leu
>WENV170965608
MTEU01004896
62501
Gammaproteobacteria
CAG
Leu
>WENV170965667
MTEU01005686
145237
Gammaproteobacteria
CAT
Met
>WENV170965433
MTEU01002322
238307
Gammaproteobacteria
GAA
Phe
>WENV170965275
MTEU01000226
96066
Gammaproteobacteria
TAA
Leu
>WENV170965399
MTEU01001995
147118
Gammaproteobacteria
GAC
Val
>WENV170965437
MTEU01002377
338337
Gammaproteobacteria
CCT
Arg
>WENV170965551
MTEU01004076
338337
Gammaproteobacteria
CCT
Arg
>WENV170965478
MTEU01003078
146807
Gammaproteobacteria
TCT
Arg
>WENV170965601
MTEU01004723
147595
Gammaproteobacteria
CCT
Arg
>WENV170965545
MTEU01003992
59415
Gammaproteobacteria
TAA
Leu
>WENV170965491
MTEU01003255
145334
Gammaproteobacteria
CCG
Arg
>WENV170965460
MTEU01002677
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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