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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170966273
MTEX01005682
23711
Gammaproteobacteria
GGA
Ser
>WENV170966152
MTEX01003013
165036
Gammaproteobacteria
CCA
Trp
>WENV170966419
MTEX01009367
165036
Gammaproteobacteria
CCA
Trp
>WENV170966206
MTEX01004266
258852
Gammaproteobacteria
TTT
Lys
>WENV170966404
MTEX01008944
258852
Gammaproteobacteria
TTT
Lys
>WENV170966080
MTEX01001303
199984
Gammaproteobacteria
CAT
Met
>WENV170966321
MTEX01006567
235516
Gammaproteobacteria
GTG
His
>WENV170966305
MTEX01006381
45109
Gammaproteobacteria
GGA
Ser
>WENV170966303
MTEX01006381
301997
Gammaproteobacteria
TTC
Glu
>WENV170966198
MTEX01003891
144979
Gammaproteobacteria
CGG
Pro
>WENV170966378
MTEX01008265
144979
Gammaproteobacteria
CGG
Pro
>WENV170966229
MTEX01004571
195519
Gammaproteobacteria
CAT
Met
>WENV170966285
MTEX01005887
195519
Gammaproteobacteria
CAT
Met
>WENV170966208
MTEX01004307
152455
Gammaproteobacteria
CAT
Met
>WENV170966403
MTEX01008898
51143
Gammaproteobacteria
TGA
Ser
>WENV170966078
MTEX01001270
44886
Gammaproteobacteria
TGA
Ser
>WENV170966207
MTEX01004266
24366
Gammaproteobacteria
GGA
Ser
>WENV170966398
MTEX01008650
16446
Gammaproteobacteria
GCT
Ser
>WENV170966232
MTEX01004636
279806
Gammaproteobacteria
TGT
Thr
>WENV170966135
MTEX01002489
144982
Gammaproteobacteria
TGG
Pro
>WENV170966247
MTEX01005111
298259
Gammaproteobacteria
GAA
Phe
>WENV170966409
MTEX01009163
307499
Gammaproteobacteria
GAA
Phe
>WENV170966410
MTEX01009163
307499
Gammaproteobacteria
GAA
Phe
>WENV170966568
MTEX01013856
174071
Gammaproteobacteria
ACG
Arg
>WENV170966284
MTEX01005824
144793
Gammaproteobacteria
GAC
Val
>WENV170966160
MTEX01003404
202944
Gammaproteobacteria
TGG
Pro
>WENV170966405
MTEX01009029
95635
Gammaproteobacteria
CAA
Leu
>WENV170966042
MTEX01000012
249157
Gammaproteobacteria
TGT
Thr
>WENV170966212
MTEX01004307
249157
Gammaproteobacteria
TGT
Thr
>WENV170966059
MTEX01000309
16242
Gammaproteobacteria
GCT
Ser
>WENV170966375
MTEX01008190
62501
Gammaproteobacteria
CAG
Leu
>WENV170966556
MTEX01013444
145237
Gammaproteobacteria
CAT
Met
>WENV170966132
MTEX01002258
238307
Gammaproteobacteria
GAA
Phe
>WENV170966317
MTEX01006512
96066
Gammaproteobacteria
TAA
Leu
>WENV170966241
MTEX01005001
238510
Gammaproteobacteria
GCC
Gly
>WENV170966244
MTEX01005001
238510
Gammaproteobacteria
GCC
Gly
>WENV170966484
MTEX01011590
238510
Gammaproteobacteria
GCC
Gly
>WENV170966515
MTEX01012257
238510
Gammaproteobacteria
GCC
Gly
>WENV170966466
MTEX01010754
309243
Gammaproteobacteria
GTT
Asn
>WENV170966242
MTEX01005001
413604
Gammaproteobacteria
GCA
Cys
>WENV170966336
MTEX01006762
191498
Gammaproteobacteria
CAT
Met
>WENV170966120
MTEX01001964
147118
Gammaproteobacteria
GAC
Val
>WENV170966203
MTEX01004037
338337
Gammaproteobacteria
CCT
Arg
>WENV170966400
MTEX01008650
165964
Gammaproteobacteria
ACG
Arg
>WENV170966064
MTEX01000612
248781
Gammaproteobacteria
TTG
Gln
>WENV170966161
MTEX01003404
146807
Gammaproteobacteria
TCT
Arg
>WENV170966053
MTEX01000156
147595
Gammaproteobacteria
CCT
Arg
>WENV170966288
MTEX01006017
353410
Gammaproteobacteria
CTG
Gln
>WENV170966334
MTEX01006726
353410
Gammaproteobacteria
CTG
Gln
>WENV170966536
MTEX01012826
59415
Gammaproteobacteria
TAA
Leu
>WENV170966258
MTEX01005543
33222
Gammaproteobacteria
GGA
Ser
>WENV170966100
MTEX01001385
80625
Gammaproteobacteria
TAA
Leu
>WENV170966421
MTEX01009381
80625
Gammaproteobacteria
TAA
Leu
>WENV170966125
MTEX01002090
238761
Gammaproteobacteria
TAC
Val
>WENV170966238
MTEX01004856
238761
Gammaproteobacteria
TAC
Val
>WENV170966163
MTEX01003512
152286
Gammaproteobacteria
GAC
Val
>WENV170966497
MTEX01011931
152286
Gammaproteobacteria
GAC
Val
>WENV170966286
MTEX01005893
145334
Gammaproteobacteria
CCG
Arg
>WENV170966475
MTEX01011207
145334
Gammaproteobacteria
CCG
Arg
>WENV170966282
MTEX01005789
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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