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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170966859
MTEY01011737
417812
Gammaproteobacteria
GCA
Cys
>WENV170966758
MTEY01007406
235516
Gammaproteobacteria
GTG
His
>WENV170966799
MTEY01008686
235516
Gammaproteobacteria
GTG
His
>WENV170966844
MTEY01011029
26080
Gammaproteobacteria
GGA
Ser
>WENV170966771
MTEY01008029
339731
Gammaproteobacteria
CTG
Gln
>WENV170966924
MTEY01014224
107766
Gammaproteobacteria
TAG
Leu
>WENV170966908
MTEY01013509
195519
Gammaproteobacteria
CAT
Met
>WENV170966856
MTEY01011714
51143
Gammaproteobacteria
TGA
Ser
>WENV170966846
MTEY01011138
16446
Gammaproteobacteria
GCT
Ser
>WENV170966608
MTEY01001027
162709
Gammaproteobacteria
CCT
Arg
>WENV170966711
MTEY01005493
279806
Gammaproteobacteria
TGT
Thr
>WENV170966644
MTEY01002258
298259
Gammaproteobacteria
GAA
Phe
>WENV170966653
MTEY01002680
298259
Gammaproteobacteria
GAA
Phe
>WENV170966623
MTEY01001538
315638
Gammaproteobacteria
TAC
Val
>WENV170966748
MTEY01007073
315638
Gammaproteobacteria
TAC
Val
>WENV170966604
MTEY01000884
238307
Gammaproteobacteria
GAA
Phe
>WENV170966804
MTEY01008961
96066
Gammaproteobacteria
TAA
Leu
>WENV170966656
MTEY01002725
347438
Gammaproteobacteria
CTG
Gln
>WENV170966752
MTEY01007125
147595
Gammaproteobacteria
CCT
Arg
>WENV170966920
MTEY01014067
353410
Gammaproteobacteria
CTG
Gln
>WENV170966680
MTEY01004334
75411
Gammaproteobacteria
GAG
Leu
>WENV170966649
MTEY01002567
80927
Gammaproteobacteria
CAA
Leu
>WENV170966857
MTEY01011737
24403
Gammaproteobacteria
TGA
Ser
>WENV170966662
MTEY01003164
145334
Gammaproteobacteria
CCG
Arg
>WENV170966783
MTEY01008317
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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