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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171003496
NNBU01000208
237493
Alphaproteobacteria
CCA
Trp
>WENV171003494
NNBU01000197
412798
Alphaproteobacteria
CTG
Gln
>WENV171003621
NNBU01000877
300133
Alphaproteobacteria
TAC
Val
>WENV171003571
NNBU01000548
95630
Alphaproteobacteria
GTA
Tyr
>WENV171003510
NNBU01000230
237489
Alphaproteobacteria
CAT
Met
>WENV171003562
NNBU01000462
146903
Alphaproteobacteria
CCT
Arg
>WENV171003513
NNBU01000231
146875
Alphaproteobacteria
GTG
His
>WENV171003492
NNBU01000197
95928
Alphaproteobacteria
TAG
Leu
>WENV171003569
NNBU01000546
25534
Alphaproteobacteria
CGA
Ser
>WENV171003508
NNBU01000230
385404
Alphaproteobacteria
CTC
Glu
>WENV171003551
NNBU01000375
237368
Alphaproteobacteria
CGT
Thr
>WENV171003609
NNBU01000730
23392
Alphaproteobacteria
GGA
Ser
>WENV171003614
NNBU01000760
254653
Alphaproteobacteria
CCA
Trp
>WENV171003524
NNBU01000239
65244
Alphaproteobacteria
CAG
Leu
>WENV171003553
NNBU01000385
144972
Alphaproteobacteria
>WENV171003599
NNBU01000691
144969
Alphaproteobacteria
CGG
Pro
>WENV171003580
NNBU01000586
338331
Alphaproteobacteria
>WENV171003581
NNBU01000586
338331
Alphaproteobacteria
>WENV171003582
NNBU01000586
338331
Alphaproteobacteria
>WENV171003605
NNBU01000710
95631
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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