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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180101411
OAOU01058818
171935
Gammaproteobacteria
ACG
Arg
>WENV180101041
OAOU01000023
145490
Gammaproteobacteria
CAT
Met
>WENV180101070
OAOU01000142
145490
Gammaproteobacteria
CAT
Met
>WENV180101092
OAOU01000430
145490
Gammaproteobacteria
CAT
Met
>WENV180101025
OAOU01000003
145493
Gammaproteobacteria
CAT
Met
>WENV180101052
OAOU01000071
145493
Gammaproteobacteria
CAT
Met
>WENV180101221
OAOU01007676
236030
Gammaproteobacteria
CCA
Trp
>WENV180101043
OAOU01000032
145492
Gammaproteobacteria
CCG
Arg
>WENV180101068
OAOU01000126
236034
Gammaproteobacteria
CCT
Arg
>WENV180101036
OAOU01000018
236032
Gammaproteobacteria
GAA
Phe
>WENV180101124
OAOU01000950
236032
Gammaproteobacteria
GAA
Phe
>WENV180101444
OAOU01062268
236032
Gammaproteobacteria
GAA
Phe
>WENV180101065
OAOU01000106
98124
Gammaproteobacteria
GAG
Leu
>WENV180101244
OAOU01011551
145489
Gammaproteobacteria
GAT
Ile
>WENV180101419
OAOU01059292
158081
Gammaproteobacteria
GAT
Ile
>WENV180101024
OAOU01000002
338634
Gammaproteobacteria
GCC
Gly
>WENV180101027
OAOU01000005
338634
Gammaproteobacteria
GCC
Gly
>WENV180101047
OAOU01000051
338634
Gammaproteobacteria
GCC
Gly
>WENV180101064
OAOU01000096
338634
Gammaproteobacteria
GCC
Gly
>WENV180101410
OAOU01058818
23442
Gammaproteobacteria
GCT
Ser
>WENV180101030
OAOU01000012
16294
Gammaproteobacteria
GGA
Ser
>WENV180101061
OAOU01000087
16294
Gammaproteobacteria
GGA
Ser
>WENV180101031
OAOU01000012
236031
Gammaproteobacteria
GGC
Ala
>WENV180101042
OAOU01000032
145491
Gammaproteobacteria
GGG
Pro
>WENV180101050
OAOU01000053
145491
Gammaproteobacteria
GGG
Pro
>WENV180101069
OAOU01000131
145491
Gammaproteobacteria
GGG
Pro
>WENV180101282
OAOU01017761
338635
Gammaproteobacteria
GGT
Thr
>WENV180101021
OAOU01000001
173617
Gammaproteobacteria
GTC
Asp
>WENV180101045
OAOU01000036
173617
Gammaproteobacteria
GTC
Asp
>WENV180101063
OAOU01000095
173617
Gammaproteobacteria
GTC
Asp
>WENV180101072
OAOU01000151
173617
Gammaproteobacteria
GTC
Asp
>WENV180101035
OAOU01000013
236026
Gammaproteobacteria
GTG
His
>WENV180101037
OAOU01000019
236027
Gammaproteobacteria
GTT
Asn
>WENV180101094
OAOU01000451
236027
Gammaproteobacteria
GTT
Asn
>WENV180101151
OAOU01001811
236027
Gammaproteobacteria
GTT
Asn
>WENV180101018
OAOU01000001
60302
Gammaproteobacteria
TAA
Leu
>WENV180101019
OAOU01000001
95717
Gammaproteobacteria
TAG
Leu
>WENV180101054
OAOU01000078
95717
Gammaproteobacteria
TAG
Leu
>WENV180101080
OAOU01000263
95717
Gammaproteobacteria
TAG
Leu
>WENV180101281
OAOU01017761
411767
Gammaproteobacteria
TCC
Gly
>WENV180101034
OAOU01000013
145487
Gammaproteobacteria
TCT
Arg
>WENV180101087
OAOU01000343
16453
Gammaproteobacteria
TGA
Ser
>WENV180101039
OAOU01000019
16293
Gammaproteobacteria
TGA
Ser
>WENV180101161
OAOU01002614
16293
Gammaproteobacteria
TGA
Ser
>WENV180101245
OAOU01011551
236029
Gammaproteobacteria
TGC
Ala
>WENV180101279
OAOU01017761
236033
Gammaproteobacteria
TGT
Thr
>WENV180101048
OAOU01000052
236025
Gammaproteobacteria
TTG
Gln
>WENV180101049
OAOU01000052
236025
Gammaproteobacteria
TTG
Gln
>WENV180101107
OAOU01000602
236025
Gammaproteobacteria
TTG
Gln
>WENV180101447
OAOU01063099
236025
Gammaproteobacteria
TTG
Gln
>WENV180101086
OAOU01000317
236028
Gammaproteobacteria
TTT
Lys
>WENV180101194
OAOU01005197
236028
Gammaproteobacteria
TTT
Lys
>WENV180101428
OAOU01060847
236028
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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