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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180103116
OAPA01002300
340312
Alphaproteobacteria
TTG
Gln
>WENV180103170
OAPA01004641
148200
Alphaproteobacteria
TGG
Pro
>WENV180103648
OAPA01106701
30581
Alphaproteobacteria
GGA
Ser
>WENV180103476
OAPA01045761
395846
Alphaproteobacteria
GAC
Val
>WENV180103381
OAPA01024256
23468
Alphaproteobacteria
GCT
Ser
>WENV180103572
OAPA01074106
421153
Alphaproteobacteria
>WENV180103585
OAPA01078183
292067
Alphaproteobacteria
GGC
Ala
>WENV180103571
OAPA01073745
340288
Alphaproteobacteria
GCC
Gly
>WENV180103511
OAPA01058550
147334
Alphaproteobacteria
CAT
Met
>WENV180103443
OAPA01039843
249928
Alphaproteobacteria
TAC
Val
>WENV180103210
OAPA01006882
244489
Alphaproteobacteria
CTT
Lys
>WENV180103453
OAPA01041304
148158
Alphaproteobacteria
ACG
Arg
>WENV180103445
OAPA01040163
192195
Alphaproteobacteria
GTC
Asp
>WENV180103085
OAPA01001525
284043
Alphaproteobacteria
CGT
Thr
>WENV180103258
OAPA01010789
163860
Alphaproteobacteria
GGG
Pro
>WENV180103245
OAPA01009963
147283
Alphaproteobacteria
GTG
His
>WENV180103237
OAPA01009393
319925
Alphaproteobacteria
TGT
Thr
>WENV180103405
OAPA01030734
377327
Alphaproteobacteria
GCC
Gly
>WENV180103386
OAPA01026611
388882
Alphaproteobacteria
GCC
Gly
>WENV180103341
OAPA01017916
113767
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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