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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180105239
OAPD01018816
154388
Bacteroidota
GTG
His
>WENV180105453
OAPD01060787
236125
Bacteroidota
GAA
Phe
>WENV180105532
OAPD01088059
236125
Bacteroidota
GAA
Phe
>WENV180105271
OAPD01023852
161616
Bacteroidota
CAT
Met
>WENV180105149
OAPD01010065
126641
Bacteroidota
TAC
Val
>WENV180105378
OAPD01041675
60695
Bacteroidota
GCT
Ser
>WENV180105064
OAPD01003226
127414
Bacteroidota
TGG
Pro
>WENV180105462
OAPD01063800
166688
Bacteroidota
GTC
Asp
>WENV180105369
OAPD01040303
44938
Bacteroidota
TGA
Ser
>WENV180105725
OAPD01171508
17496
Bacteroidota
GGA
Ser
>WENV180105289
OAPD01026257
113694
Bacteroidota
GTA
Tyr
>WENV180105414
OAPD01049849
240901
Bacteroidota
TTT
Lys
>WENV180105519
OAPD01082928
48382
Bacteroidota
TGA
Ser
>WENV180105437
OAPD01055481
127216
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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