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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180106285
OAPE01063050
165250
Alphaproteobacteria
TGG
Pro
>WENV180106522
OAPE01149036
113700
Alphaproteobacteria
>WENV180106550
OAPE01160716
109657
Alphaproteobacteria
TAG
Leu
>WENV180106366
OAPE01089300
147083
Alphaproteobacteria
GGG
Pro
>WENV180106131
OAPE01025847
28682
Alphaproteobacteria
GGA
Ser
>WENV180105791
OAPE01000172
241518
Alphaproteobacteria
CCA
Trp
>WENV180106361
OAPE01086506
319925
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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