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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180110340
OAPM01018418
312287
Gammaproteobacteria
TGT
Thr
>WENV180110321
OAPM01014309
244202
Gammaproteobacteria
TTT
Lys
>WENV180110308
OAPM01010404
46594
Gammaproteobacteria
GGA
Ser
>WENV180110406
OAPM01043794
235452
Gammaproteobacteria
GAA
Phe
>WENV180110455
OAPM01067812
240642
Gammaproteobacteria
GTT
Asn
>WENV180110468
OAPM01073721
245602
Gammaproteobacteria
TTT
Lys
>WENV180110240
OAPM01004069
322642
Gammaproteobacteria
GGT
Thr
>WENV180110250
OAPM01005300
202944
Gammaproteobacteria
TGG
Pro
>WENV180110276
OAPM01006878
311863
Gammaproteobacteria
GGC
Ala
>WENV180110337
OAPM01018012
237438
Gammaproteobacteria
GAA
Phe
>WENV180110316
OAPM01012251
236000
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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