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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180112732
OAPP01088621
145317
Gammaproteobacteria
ACG
Arg
>WENV180112671
OAPP01066692
239236
Gammaproteobacteria
>WENV180112974
OAPP01211576
147053
Gammaproteobacteria
GTT
Asn
>WENV180112932
OAPP01177770
59177
Gammaproteobacteria
TAA
Leu
>WENV180112444
OAPP01023303
185163
Gammaproteobacteria
ACG
Arg
>WENV180112563
OAPP01039612
270709
Gammaproteobacteria
GTG
His
>WENV180112735
OAPP01089231
301232
Gammaproteobacteria
TTC
Glu
>WENV180112883
OAPP01156274
97031
Gammaproteobacteria
TAG
Leu
>WENV180112946
OAPP01191101
149038
Gammaproteobacteria
TGG
Pro
>WENV180112661
OAPP01063363
96362
Gammaproteobacteria
TAG
Leu
>WENV180112882
OAPP01156274
147123
Gammaproteobacteria
CAT
Met
>WENV180112896
OAPP01163720
193276
Gammaproteobacteria
ACG
Arg
>WENV180112791
OAPP01109749
293332
Gammaproteobacteria
GAA
Phe
>WENV180112663
OAPP01063514
237421
Gammaproteobacteria
TGT
Thr
>WENV180112764
OAPP01103004
17756
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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