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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180113590
OAPR01000986
312287
Gammaproteobacteria
TGT
Thr
>WENV180113893
OAPR01045654
248041
Gammaproteobacteria
GGC
Ala
>WENV180113678
OAPR01007479
149578
Gammaproteobacteria
ACG
Arg
>WENV180113623
OAPR01002976
322642
Gammaproteobacteria
GGT
Thr
>WENV180113622
OAPR01002976
412476
Gammaproteobacteria
TCC
Gly
>WENV180113649
OAPR01004695
411842
Gammaproteobacteria
GCA
Cys
>WENV180113658
OAPR01005641
237421
Gammaproteobacteria
TGT
Thr
>WENV180113655
OAPR01005370
163882
Gammaproteobacteria
GAC
Val
>WENV180114172
OAPR01197736
16840
Gammaproteobacteria
GGA
Ser
>WENV180113811
OAPR01028894
240536
Gammaproteobacteria
TTT
Lys
>WENV180114100
OAPR01153820
198797
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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