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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180116869
OARB01000009
145317
Gammaproteobacteria
ACG
Arg
>WENV180116849
OARB01000002
235449
Gammaproteobacteria
>WENV180116851
OARB01000002
235449
Gammaproteobacteria
>WENV180116893
OARB01000024
235449
Gammaproteobacteria
>WENV180116894
OARB01000024
235449
Gammaproteobacteria
>WENV180116895
OARB01000024
235449
Gammaproteobacteria
>WENV180116897
OARB01000024
235449
Gammaproteobacteria
>WENV180116885
OARB01000016
144917
Gammaproteobacteria
>WENV180116829
OARB01000001
144950
Gammaproteobacteria
GGG
Pro
>WENV180116870
OARB01000009
114623
Gammaproteobacteria
GAG
Leu
>WENV180116833
OARB01000001
95726
Gammaproteobacteria
>WENV180116838
OARB01000001
95726
Gammaproteobacteria
>WENV180116840
OARB01000001
95726
Gammaproteobacteria
>WENV180116844
OARB01000001
95726
Gammaproteobacteria
>WENV180116846
OARB01000001
95726
Gammaproteobacteria
>WENV180116847
OARB01000002
250266
Gammaproteobacteria
GTT
Asn
>WENV180116852
OARB01000004
411729
Gammaproteobacteria
>WENV180116854
OARB01000004
411729
Gammaproteobacteria
>WENV180116964
OARB01000638
235488
Gammaproteobacteria
TAC
Val
>WENV180116873
OARB01000013
235452
Gammaproteobacteria
GAA
Phe
>WENV180116877
OARB01000013
235452
Gammaproteobacteria
GAA
Phe
>WENV180116832
OARB01000001
80691
Gammaproteobacteria
CAG
Leu
>WENV180116836
OARB01000001
80691
Gammaproteobacteria
CAG
Leu
>WENV180116842
OARB01000001
80691
Gammaproteobacteria
CAG
Leu
>WENV180116937
OARB01000136
103203
Gammaproteobacteria
>WENV180116985
OARB01028520
103203
Gammaproteobacteria
>WENV180116963
OARB01000638
339614
Gammaproteobacteria
TTT
Lys
>WENV180116939
OARB01000136
236119
Gammaproteobacteria
GGT
Thr
>WENV180116889
OARB01000023
9227
Gammaproteobacteria
GCT
Ser
>WENV180116891
OARB01000023
9227
Gammaproteobacteria
GCT
Ser
>WENV180116857
OARB01000005
95725
Gammaproteobacteria
CAA
Leu
>WENV180116898
OARB01000024
190282
Gammaproteobacteria
CAT
Met
>WENV180116896
OARB01000024
195299
Gammaproteobacteria
CAT
Met
>WENV180116899
OARB01000024
195299
Gammaproteobacteria
CAT
Met
>WENV180116861
OARB01000007
44883
Gammaproteobacteria
GGA
Ser
>WENV180116860
OARB01000006
145547
Gammaproteobacteria
GAC
Val
>WENV180116834
OARB01000001
343593
Gammaproteobacteria
>WENV180116837
OARB01000001
343593
Gammaproteobacteria
>WENV180116843
OARB01000001
343593
Gammaproteobacteria
>WENV180116845
OARB01000001
343593
Gammaproteobacteria
>WENV180116868
OARB01000009
145320
Gammaproteobacteria
ACG
Arg
>WENV180116890
OARB01000023
145320
Gammaproteobacteria
ACG
Arg
>WENV180116876
OARB01000013
238714
Gammaproteobacteria
GTT
Asn
>WENV180116879
OARB01000013
238714
Gammaproteobacteria
GTT
Asn
>WENV180116881
OARB01000013
238714
Gammaproteobacteria
GTT
Asn
>WENV180116872
OARB01000012
235317
Gammaproteobacteria
GGT
Thr
>WENV180116828
OARB01000001
145548
Gammaproteobacteria
TCT
Arg
>WENV180116850
OARB01000002
58760
Gammaproteobacteria
>WENV180116853
OARB01000004
58760
Gammaproteobacteria
>WENV180116827
OARB01000001
189760
Gammaproteobacteria
TGG
Pro
>WENV180116865
OARB01000008
189760
Gammaproteobacteria
TGG
Pro
>WENV180116867
OARB01000008
189760
Gammaproteobacteria
TGG
Pro
>WENV180116848
OARB01000002
432040
Gammaproteobacteria
GCA
Cys
>WENV180116875
OARB01000013
235453
Gammaproteobacteria
GAA
Phe
>WENV180116839
OARB01000001
338678
Gammaproteobacteria
>WENV180116830
OARB01000001
16250
Gammaproteobacteria
TGA
Ser
>WENV180116862
OARB01000008
16250
Gammaproteobacteria
TGA
Ser
>WENV180116859
OARB01000006
147159
Gammaproteobacteria
>WENV180116892
OARB01000023
236117
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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