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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180117722
OARM01000020
145317
Gammaproteobacteria
ACG
Arg
>WENV180117788
OARM01000073
145317
Gammaproteobacteria
ACG
Arg
>WENV180117676
OARM01000001
235449
Gammaproteobacteria
>WENV180117678
OARM01000001
235449
Gammaproteobacteria
>WENV180117792
OARM01000078
235449
Gammaproteobacteria
>WENV180117793
OARM01000078
235449
Gammaproteobacteria
>WENV180117794
OARM01000078
235449
Gammaproteobacteria
>WENV180117796
OARM01000078
235449
Gammaproteobacteria
>WENV180117758
OARM01000050
144917
Gammaproteobacteria
>WENV180117680
OARM01000002
144950
Gammaproteobacteria
GGG
Pro
>WENV180117723
OARM01000020
114623
Gammaproteobacteria
GAG
Leu
>WENV180117684
OARM01000002
95726
Gammaproteobacteria
>WENV180117689
OARM01000002
95726
Gammaproteobacteria
>WENV180117692
OARM01000005
95726
Gammaproteobacteria
>WENV180117969
OARM01050851
95726
Gammaproteobacteria
>WENV180117670
OARM01000001
250266
Gammaproteobacteria
GTT
Asn
>WENV180117746
OARM01000041
411729
Gammaproteobacteria
>WENV180117748
OARM01000041
411729
Gammaproteobacteria
>WENV180117937
OARM01002787
235488
Gammaproteobacteria
TAC
Val
>WENV180117726
OARM01000025
235452
Gammaproteobacteria
GAA
Phe
>WENV180117730
OARM01000025
235452
Gammaproteobacteria
GAA
Phe
>WENV180117683
OARM01000002
80691
Gammaproteobacteria
CAG
Leu
>WENV180117687
OARM01000002
80691
Gammaproteobacteria
CAG
Leu
>WENV180117671
OARM01000001
103203
Gammaproteobacteria
>WENV180117672
OARM01000001
103203
Gammaproteobacteria
>WENV180117673
OARM01000001
103203
Gammaproteobacteria
>WENV180117674
OARM01000001
103203
Gammaproteobacteria
>WENV180117832
OARM01000308
103203
Gammaproteobacteria
>WENV180117936
OARM01002787
339614
Gammaproteobacteria
TTT
Lys
>WENV180117834
OARM01000308
236119
Gammaproteobacteria
GGT
Thr
>WENV180117785
OARM01000073
9227
Gammaproteobacteria
GCT
Ser
>WENV180117787
OARM01000073
9227
Gammaproteobacteria
GCT
Ser
>WENV180117695
OARM01000006
95725
Gammaproteobacteria
CAA
Leu
>WENV180117797
OARM01000078
190282
Gammaproteobacteria
CAT
Met
>WENV180117795
OARM01000078
195299
Gammaproteobacteria
CAT
Met
>WENV180117798
OARM01000078
195299
Gammaproteobacteria
CAT
Met
>WENV180117703
OARM01000011
44883
Gammaproteobacteria
GGA
Ser
>WENV180117698
OARM01000009
145547
Gammaproteobacteria
GAC
Val
>WENV180117685
OARM01000002
343593
Gammaproteobacteria
>WENV180117688
OARM01000002
343593
Gammaproteobacteria
>WENV180117786
OARM01000073
145320
Gammaproteobacteria
ACG
Arg
>WENV180117764
OARM01000051
203133
Gammaproteobacteria
TCT
Arg
>WENV180117729
OARM01000025
238714
Gammaproteobacteria
GTT
Asn
>WENV180117732
OARM01000025
238714
Gammaproteobacteria
GTT
Asn
>WENV180117734
OARM01000025
238714
Gammaproteobacteria
GTT
Asn
>WENV180117816
OARM01000157
235317
Gammaproteobacteria
GGT
Thr
>WENV180117679
OARM01000002
145548
Gammaproteobacteria
TCT
Arg
>WENV180117677
OARM01000001
58760
Gammaproteobacteria
>WENV180117747
OARM01000041
58760
Gammaproteobacteria
>WENV180117693
OARM01000005
189760
Gammaproteobacteria
TGG
Pro
>WENV180117707
OARM01000012
189760
Gammaproteobacteria
TGG
Pro
>WENV180117709
OARM01000012
189760
Gammaproteobacteria
TGG
Pro
>WENV180117675
OARM01000001
432040
Gammaproteobacteria
GCA
Cys
>WENV180117728
OARM01000025
235453
Gammaproteobacteria
GAA
Phe
>WENV180117690
OARM01000002
338678
Gammaproteobacteria
>WENV180117681
OARM01000002
16250
Gammaproteobacteria
TGA
Ser
>WENV180117704
OARM01000012
16250
Gammaproteobacteria
TGA
Ser
>WENV180117789
OARM01000073
236117
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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