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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180119605
OASE01000348
95987
Bacteroidota
CAA
Leu
>WENV180119610
OASE01000456
95987
Bacteroidota
CAA
Leu
>WENV180119621
OASE01000594
95987
Bacteroidota
CAA
Leu
>WENV180119759
OASE01005256
95987
Bacteroidota
CAA
Leu
>WENV180120059
OASE01073217
95987
Bacteroidota
CAA
Leu
>WENV180119855
OASE01013355
339412
Bacteroidota
GGT
Thr
>WENV180119889
OASE01018332
339412
Bacteroidota
GGT
Thr
>WENV180119516
OASE01000039
237796
Bacteroidota
CGT
Thr
>WENV180119510
OASE01000033
97336
Bacteroidota
CAG
Leu
>WENV180120014
OASE01056515
97336
Bacteroidota
CAG
Leu
>WENV180120111
OASE01108064
97336
Bacteroidota
CAG
Leu
>WENV180119641
OASE01000784
413663
Bacteroidota
CTG
Gln
>WENV180120123
OASE01114838
413663
Bacteroidota
CTG
Gln
>WENV180119608
OASE01000442
136244
Bacteroidota
TAC
Val
>WENV180119673
OASE01001612
136244
Bacteroidota
TAC
Val
>WENV180119691
OASE01002229
136244
Bacteroidota
TAC
Val
>WENV180119701
OASE01002835
136244
Bacteroidota
TAC
Val
>WENV180119827
OASE01009146
136244
Bacteroidota
TAC
Val
>WENV180119892
OASE01018918
136244
Bacteroidota
TAC
Val
>WENV180120013
OASE01055016
136244
Bacteroidota
TAC
Val
>WENV180119994
OASE01048191
237797
Bacteroidota
CCA
Trp
>WENV180119670
OASE01001512
144695
Bacteroidota
CAT
Met
>WENV180119671
OASE01001572
144695
Bacteroidota
CAT
Met
>WENV180119564
OASE01000127
412479
Bacteroidota
TTG
Gln
>WENV180119747
OASE01004769
412479
Bacteroidota
TTG
Gln
>WENV180119609
OASE01000451
147147
Bacteroidota
GTG
His
>WENV180119658
OASE01001142
147147
Bacteroidota
GTG
His
>WENV180119663
OASE01001283
147147
Bacteroidota
GTG
His
>WENV180119762
OASE01005341
147147
Bacteroidota
GTG
His
>WENV180119777
OASE01006108
147147
Bacteroidota
GTG
His
>WENV180119819
OASE01008623
147147
Bacteroidota
GTG
His
>WENV180119820
OASE01008638
147147
Bacteroidota
GTG
His
>WENV180119615
OASE01000527
155123
Bacteroidota
GTT
Asn
>WENV180119709
OASE01003132
155123
Bacteroidota
GTT
Asn
>WENV180119990
OASE01048097
145504
Bacteroidota
TGT
Thr
>WENV180119504
OASE01000022
238810
Bacteroidota
CGG
Pro
>WENV180120005
OASE01051311
193809
Bacteroidota
CAT
Met
>WENV180119596
OASE01000280
37076
Bacteroidota
TAA
Leu
>WENV180119614
OASE01000519
37076
Bacteroidota
TAA
Leu
>WENV180119687
OASE01002031
37076
Bacteroidota
TAA
Leu
>WENV180119697
OASE01002635
37076
Bacteroidota
TAA
Leu
>WENV180119774
OASE01005903
37076
Bacteroidota
TAA
Leu
>WENV180120114
OASE01112361
37076
Bacteroidota
TAA
Leu
>WENV180119514
OASE01000036
344769
Bacteroidota
CTC
Glu
>WENV180119698
OASE01002706
344769
Bacteroidota
CTC
Glu
>WENV180119738
OASE01004279
344769
Bacteroidota
CTC
Glu
>WENV180120109
OASE01105960
344769
Bacteroidota
CTC
Glu
>WENV180120120
OASE01114315
344769
Bacteroidota
CTC
Glu
>WENV180120122
OASE01114733
344769
Bacteroidota
CTC
Glu
>WENV180119601
OASE01000318
147148
Bacteroidota
CAT
Met
>WENV180119677
OASE01001813
415558
Bacteroidota
TTG
Gln
>WENV180119826
OASE01009001
175704
Bacteroidota
TGC
Ala
>WENV180120044
OASE01069197
175704
Bacteroidota
TGC
Ala
>WENV180119556
OASE01000100
419272
Bacteroidota
CTG
Gln
>WENV180119544
OASE01000077
139743
Bacteroidota
GGG
Pro
>WENV180119587
OASE01000258
139743
Bacteroidota
GGG
Pro
>WENV180119632
OASE01000718
16494
Bacteroidota
GGA
Ser
>WENV180119637
OASE01000759
196394
Bacteroidota
GTC
Asp
>WENV180119730
OASE01003788
196394
Bacteroidota
GTC
Asp
>WENV180119752
OASE01005007
196394
Bacteroidota
GTC
Asp
>WENV180119770
OASE01005727
196394
Bacteroidota
GTC
Asp
>WENV180119836
OASE01009551
196394
Bacteroidota
GTC
Asp
>WENV180119837
OASE01009592
196394
Bacteroidota
GTC
Asp
>WENV180120070
OASE01076564
196394
Bacteroidota
GTC
Asp
>WENV180119729
OASE01003779
412236
Bacteroidota
CCC
Gly
>WENV180119577
OASE01000192
146764
Bacteroidota
GTC
Asp
>WENV180119578
OASE01000192
146764
Bacteroidota
GTC
Asp
>WENV180120020
OASE01058859
127023
Bacteroidota
GGG
Pro
>WENV180119600
OASE01000306
313363
Bacteroidota
GAA
Phe
>WENV180119660
OASE01001186
313363
Bacteroidota
GAA
Phe
>WENV180119674
OASE01001670
313363
Bacteroidota
GAA
Phe
>WENV180119690
OASE01002207
313363
Bacteroidota
GAA
Phe
>WENV180119696
OASE01002629
313363
Bacteroidota
GAA
Phe
>WENV180119758
OASE01005165
313363
Bacteroidota
GAA
Phe
>WENV180119806
OASE01007139
313363
Bacteroidota
GAA
Phe
>WENV180119821
OASE01008646
313363
Bacteroidota
GAA
Phe
>WENV180119848
OASE01012375
313363
Bacteroidota
GAA
Phe
>WENV180119902
OASE01021196
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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