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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180120541
OASP01000001
338155
Bacteroidota
CTC
Glu
>WENV180120557
OASP01000003
95618
Bacteroidota
TAG
Leu
>WENV180120588
OASP01000014
411543
Bacteroidota
CTG
Gln
>WENV180120565
OASP01000004
235182
Bacteroidota
>WENV180120587
OASP01000012
272983
Bacteroidota
CGT
Thr
>WENV180120582
OASP01000010
338132
Bacteroidota
GCA
Cys
>WENV180120631
OASP01000038
144688
Bacteroidota
CAT
Met
>WENV180120550
OASP01000002
181746
Bacteroidota
GGC
Ala
>WENV180120556
OASP01000003
301449
Bacteroidota
CGG
Pro
>WENV180120543
OASP01000001
144933
Bacteroidota
TCT
Arg
>WENV180120589
OASP01000014
141414
Bacteroidota
GGG
Pro
>WENV180120648
OASP01000050
235207
Bacteroidota
CAT
Met
>WENV180120578
OASP01000009
80607
Bacteroidota
GTA
Tyr
>WENV180120601
OASP01000021
338314
Bacteroidota
CCT
Arg
>WENV180120623
OASP01000033
338165
Bacteroidota
GGT
Thr
>WENV180120573
OASP01000006
19317
Bacteroidota
GGA
Ser
>WENV180120567
OASP01000004
139062
Bacteroidota
TGG
Pro
>WENV180120580
OASP01000010
55270
Bacteroidota
TGA
Ser
>WENV180120581
OASP01000010
55270
Bacteroidota
TGA
Ser
>WENV180120598
OASP01000019
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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