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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180133759
OATJ01002255
235146
Actinomycetota
CGT
Thr
>WENV180133763
OATJ01002420
119475
Actinomycetota
TAA
Leu
>WENV180133947
OATJ01010569
235347
Actinomycetota
GGC
Ala
>WENV180133505
OATJ01000277
235153
Actinomycetota
CCT
Arg
>WENV180133762
OATJ01002385
37070
Actinomycetota
CGA
Ser
>WENV180133809
OATJ01003472
201717
Actinomycetota
CTT
Lys
>WENV180133960
OATJ01011419
144600
Actinomycetota
TGG
Pro
>WENV180133801
OATJ01003288
235194
Actinomycetota
GTG
His
>WENV180133757
OATJ01002255
273786
Actinomycetota
CGT
Thr
>WENV180133881
OATJ01006588
158720
Actinomycetota
ACG
Arg
>WENV180133882
OATJ01006588
158720
Actinomycetota
ACG
Arg
>WENV180133709
OATJ01001530
245301
Actinomycetota
GCC
Gly
>WENV180133711
OATJ01001530
245301
Actinomycetota
GCC
Gly
>WENV180133712
OATJ01001530
245301
Actinomycetota
GCC
Gly
>WENV180133957
OATJ01011151
411601
Actinomycetota
CCC
Gly
>WENV180133872
OATJ01006277
23370
Actinomycetota
GCT
Ser
>WENV180133690
OATJ01001286
174149
Actinomycetota
GAT
Ile
>WENV180133834
OATJ01004375
338239
Actinomycetota
TTC
Glu
>WENV180133691
OATJ01001286
235174
Actinomycetota
TGC
Ala
>WENV180133639
OATJ01000827
235101
Actinomycetota
TTT
Lys
>WENV180134212
OATJ01076448
121510
Actinomycetota
TAA
Leu
>WENV180134228
OATJ01086458
356045
Actinomycetota
GAC
Val
>WENV180133718
OATJ01001588
144625
Actinomycetota
GTC
Asp
>WENV180133733
OATJ01001770
153948
Actinomycetota
GGG
Pro
>WENV180133695
OATJ01001331
145345
Actinomycetota
TAC
Val
>WENV180134116
OATJ01038083
235199
Actinomycetota
CAC
Val
>WENV180133777
OATJ01002688
44862
Actinomycetota
CGA
Ser
>WENV180134233
OATJ01086753
413665
Actinomycetota
TTG
Gln
>WENV180134056
OATJ01022512
254857
Actinomycetota
CCG
Arg
>WENV180133746
OATJ01002097
144593
Actinomycetota
TAT
Ile
>WENV180133813
OATJ01003512
144700
Actinomycetota
CAT
Met
>WENV180133448
OATJ01000167
144636
Actinomycetota
GAT
Ile
>WENV180133450
OATJ01000167
144636
Actinomycetota
GAT
Ile
>WENV180134047
OATJ01019907
295695
Actinomycetota
CTC
Glu
>WENV180134064
OATJ01025258
98279
Actinomycetota
GTA
Tyr
>WENV180133767
OATJ01002604
235148
Actinomycetota
GTT
Asn
>WENV180133744
OATJ01002015
53078
Actinomycetota
GGA
Ser
>WENV180134222
OATJ01084911
338238
Actinomycetota
CCA
Trp
>WENV180133822
OATJ01003942
176456
Actinomycetota
TCT
Arg
>WENV180133906
OATJ01008005
144825
Actinomycetota
CAT
Met
>WENV180133896
OATJ01007199
119508
Actinomycetota
TAA
Leu
>WENV180133670
OATJ01001128
338139
Actinomycetota
GTT
Asn
>WENV180133671
OATJ01001128
338139
Actinomycetota
GTT
Asn
>WENV180134097
OATJ01031595
235348
Actinomycetota
CCT
Arg
>WENV180133656
OATJ01001032
411554
Actinomycetota
CCC
Gly
>WENV180133758
OATJ01002255
113601
Actinomycetota
TAG
Leu
>WENV180133895
OATJ01007070
113601
Actinomycetota
TAG
Leu
>WENV180133684
OATJ01001273
144595
Actinomycetota
CAA
Leu
>WENV180133864
OATJ01005645
144595
Actinomycetota
CAA
Leu
>WENV180134062
OATJ01024470
144595
Actinomycetota
CAA
Leu
>WENV180133806
OATJ01003447
235149
Actinomycetota
CCT
Arg
>WENV180133575
OATJ01000486
414234
Actinomycetota
CTG
Gln
>WENV180133894
OATJ01007070
235121
Actinomycetota
CGT
Thr
>WENV180133685
OATJ01001273
144635
Actinomycetota
TGG
Pro
>WENV180133488
OATJ01000230
61501
Actinomycetota
CAG
Leu
>WENV180133928
OATJ01008959
80622
Actinomycetota
CAG
Leu
>WENV180134017
OATJ01016127
44851
Actinomycetota
TGA
Ser
>WENV180134108
OATJ01035600
16222
Actinomycetota
GAG
Leu
>WENV180133500
OATJ01000265
158513
Actinomycetota
TGG
Pro
>WENV180133710
OATJ01001530
412834
Actinomycetota
GCA
Cys
>WENV180133840
OATJ01004827
235173
Actinomycetota
GGC
Ala
>WENV180133799
OATJ01003229
243162
Actinomycetota
GTT
Asn
>WENV180133800
OATJ01003229
243162
Actinomycetota
GTT
Asn
>WENV180133883
OATJ01006595
243162
Actinomycetota
GTT
Asn
>WENV180133816
OATJ01003617
144660
Actinomycetota
TAC
Val
>WENV180133812
OATJ01003512
95593
Actinomycetota
>WENV180133791
OATJ01003060
144823
Actinomycetota
TCT
Arg
>WENV180133923
OATJ01008702
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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