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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180137783
OATP01000496
238559
Gammaproteobacteria
CTT
Lys
>WENV180137753
OATP01000390
60476
Gammaproteobacteria
TAA
Leu
>WENV180138051
OATP01003829
27259
Gammaproteobacteria
GGA
Ser
>WENV180137599
OATP01000072
237462
Gammaproteobacteria
GTG
His
>WENV180137900
OATP01001316
342830
Gammaproteobacteria
>WENV180137872
OATP01001034
45932
Gammaproteobacteria
TGA
Ser
>WENV180137736
OATP01000338
161470
Gammaproteobacteria
TCT
Arg
>WENV180137763
OATP01000440
3243
Gammaproteobacteria
>WENV180137962
OATP01001991
341782
Gammaproteobacteria
TTG
Gln
>WENV180137963
OATP01001991
341782
Gammaproteobacteria
TTG
Gln
>WENV180137805
OATP01000635
144736
Gammaproteobacteria
ACG
Arg
>WENV180137820
OATP01000726
45742
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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