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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180142681
OATX01000064
235097
Bacteroidota
TTT
Lys
>WENV180142865
OATX01000728
235097
Bacteroidota
TTT
Lys
>WENV180143564
OATX01111645
235097
Bacteroidota
TTT
Lys
>WENV180142841
OATX01000502
235102
Bacteroidota
CGT
Thr
>WENV180143304
OATX01019237
267954
Bacteroidota
GCC
Gly
>WENV180142651
OATX01000030
338155
Bacteroidota
CTC
Glu
>WENV180142977
OATX01002106
338155
Bacteroidota
CTC
Glu
>WENV180142793
OATX01000344
95618
Bacteroidota
TAG
Leu
>WENV180143244
OATX01012777
338486
Bacteroidota
CAT
Met
>WENV180142687
OATX01000069
415410
Bacteroidota
TTG
Gln
>WENV180142690
OATX01000075
415410
Bacteroidota
TTG
Gln
>WENV180142739
OATX01000154
415410
Bacteroidota
TTG
Gln
>WENV180142815
OATX01000398
415410
Bacteroidota
TTG
Gln
>WENV180142888
OATX01001009
415410
Bacteroidota
TTG
Gln
>WENV180142628
OATX01000009
411543
Bacteroidota
CTG
Gln
>WENV180142794
OATX01000347
235182
Bacteroidota
>WENV180142755
OATX01000223
338124
Bacteroidota
CCG
Arg
>WENV180143352
OATX01025150
238121
Bacteroidota
CTT
Lys
>WENV180143220
OATX01011085
126641
Bacteroidota
TAC
Val
>WENV180142673
OATX01000055
338132
Bacteroidota
GCA
Cys
>WENV180142674
OATX01000055
338132
Bacteroidota
GCA
Cys
>WENV180142772
OATX01000254
338132
Bacteroidota
GCA
Cys
>WENV180142776
OATX01000269
338132
Bacteroidota
GCA
Cys
>WENV180142842
OATX01000506
338132
Bacteroidota
GCA
Cys
>WENV180142969
OATX01001966
338132
Bacteroidota
GCA
Cys
>WENV180143056
OATX01003637
338132
Bacteroidota
GCA
Cys
>WENV180142714
OATX01000103
144688
Bacteroidota
CAT
Met
>WENV180143010
OATX01002728
193809
Bacteroidota
CAT
Met
>WENV180142725
OATX01000133
181746
Bacteroidota
GGC
Ala
>WENV180142634
OATX01000013
144933
Bacteroidota
TCT
Arg
>WENV180142873
OATX01000781
144933
Bacteroidota
TCT
Arg
>WENV180143023
OATX01002836
144933
Bacteroidota
TCT
Arg
>WENV180142759
OATX01000233
144656
Bacteroidota
GTG
His
>WENV180142692
OATX01000076
235207
Bacteroidota
CAT
Met
>WENV180142744
OATX01000172
235207
Bacteroidota
CAT
Met
>WENV180142745
OATX01000172
235207
Bacteroidota
CAT
Met
>WENV180143103
OATX01004967
235207
Bacteroidota
CAT
Met
>WENV180143264
OATX01013502
235207
Bacteroidota
CAT
Met
>WENV180143436
OATX01039298
235180
Bacteroidota
CCA
Trp
>WENV180142738
OATX01000145
144596
Bacteroidota
GGC
Ala
>WENV180142910
OATX01001175
144596
Bacteroidota
GGC
Ala
>WENV180142633
OATX01000012
80607
Bacteroidota
GTA
Tyr
>WENV180142643
OATX01000023
80607
Bacteroidota
GTA
Tyr
>WENV180142660
OATX01000042
80607
Bacteroidota
GTA
Tyr
>WENV180142704
OATX01000091
80607
Bacteroidota
GTA
Tyr
>WENV180142719
OATX01000118
80607
Bacteroidota
GTA
Tyr
>WENV180143109
OATX01005522
80607
Bacteroidota
GTA
Tyr
>WENV180143166
OATX01007979
80607
Bacteroidota
GTA
Tyr
>WENV180142694
OATX01000080
113604
Bacteroidota
>WENV180142670
OATX01000051
52358
Bacteroidota
TGA
Ser
>WENV180142743
OATX01000171
52358
Bacteroidota
TGA
Ser
>WENV180142749
OATX01000192
52358
Bacteroidota
TGA
Ser
>WENV180142774
OATX01000265
52358
Bacteroidota
TGA
Ser
>WENV180142789
OATX01000313
52358
Bacteroidota
TGA
Ser
>WENV180142914
OATX01001316
52358
Bacteroidota
TGA
Ser
>WENV180142952
OATX01001718
52358
Bacteroidota
TGA
Ser
>WENV180143027
OATX01002890
52358
Bacteroidota
TGA
Ser
>WENV180143556
OATX01110771
52358
Bacteroidota
TGA
Ser
>WENV180143101
OATX01004860
52358
Bacteroidota
TGA
Ser
>WENV180143181
OATX01008994
154643
Bacteroidota
CAT
Met
>WENV180142661
OATX01000042
144590
Bacteroidota
GTT
Asn
>WENV180142662
OATX01000042
144590
Bacteroidota
GTT
Asn
>WENV180142813
OATX01000394
95559
Bacteroidota
TAG
Leu
>WENV180142727
OATX01000134
419272
Bacteroidota
CTG
Gln
>WENV180142734
OATX01000141
144655
Bacteroidota
GGC
Ala
>WENV180143461
OATX01047210
338164
Bacteroidota
TTC
Glu
>WENV180142654
OATX01000034
338314
Bacteroidota
CCT
Arg
>WENV180142757
OATX01000226
44852
Bacteroidota
TAA
Leu
>WENV180142944
OATX01001583
150485
Bacteroidota
GTT
Asn
>WENV180143526
OATX01085521
150485
Bacteroidota
GTT
Asn
>WENV180143561
OATX01111443
150485
Bacteroidota
GTT
Asn
>WENV180143119
OATX01006005
411550
Bacteroidota
CTG
Gln
>WENV180143553
OATX01109485
338165
Bacteroidota
GGT
Thr
>WENV180142848
OATX01000555
19528
Bacteroidota
GGA
Ser
>WENV180142625
OATX01000002
132360
Bacteroidota
GGG
Pro
>WENV180142629
OATX01000009
132360
Bacteroidota
GGG
Pro
>WENV180142726
OATX01000134
132360
Bacteroidota
GGG
Pro
>WENV180142857
OATX01000641
132360
Bacteroidota
GGG
Pro
>WENV180142912
OATX01001242
132360
Bacteroidota
GGG
Pro
>WENV180142792
OATX01000341
425638
Bacteroidota
CTG
Gln
>WENV180142864
OATX01000718
425638
Bacteroidota
CTG
Gln
>WENV180142990
OATX01002258
425638
Bacteroidota
CTG
Gln
>WENV180143118
OATX01005960
425638
Bacteroidota
CTG
Gln
>WENV180142775
OATX01000268
19317
Bacteroidota
GGA
Ser
>WENV180143079
OATX01004268
353927
Bacteroidota
TTC
Glu
>WENV180142650
OATX01000030
23696
Bacteroidota
GCT
Ser
>WENV180143050
OATX01003533
414426
Bacteroidota
CTG
Gln
>WENV180142810
OATX01000382
16224
Bacteroidota
GGA
Ser
>WENV180142894
OATX01001041
16224
Bacteroidota
GGA
Ser
>WENV180142655
OATX01000036
16220
Bacteroidota
GGA
Ser
>WENV180142646
OATX01000025
338125
Bacteroidota
CCT
Arg
>WENV180142716
OATX01000114
338125
Bacteroidota
CCT
Arg
>WENV180142880
OATX01000878
338125
Bacteroidota
CCT
Arg
>WENV180142805
OATX01000365
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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