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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180144828
OAUB01000325
152600
Gammaproteobacteria
TCT
Arg
>WENV180144897
OAUB01000912
152600
Gammaproteobacteria
TCT
Arg
>WENV180144760
OAUB01000201
145364
Gammaproteobacteria
GGG
Pro
>WENV180144635
OAUB01000046
342830
Gammaproteobacteria
>WENV180144636
OAUB01000046
342830
Gammaproteobacteria
>WENV180144940
OAUB01004671
240084
Gammaproteobacteria
GGT
Thr
>WENV180144833
OAUB01000337
340341
Gammaproteobacteria
TCC
Gly
>WENV180144791
OAUB01000254
240182
Gammaproteobacteria
TTT
Lys
>WENV180144793
OAUB01000254
240182
Gammaproteobacteria
TTT
Lys
>WENV180144794
OAUB01000254
240182
Gammaproteobacteria
TTT
Lys
>WENV180144796
OAUB01000254
240182
Gammaproteobacteria
TTT
Lys
>WENV180144797
OAUB01000254
240182
Gammaproteobacteria
TTT
Lys
>WENV180144798
OAUB01000254
240182
Gammaproteobacteria
TTT
Lys
>WENV180144889
OAUB01000781
240182
Gammaproteobacteria
TTT
Lys
>WENV180144924
OAUB01003573
145502
Gammaproteobacteria
TCT
Arg
>WENV180144639
OAUB01000048
147159
Gammaproteobacteria
>WENV180144883
OAUB01000763
242934
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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