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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180147160
OAUG01001036
235146
Actinomycetota
CGT
Thr
>WENV180147155
OAUG01000993
235347
Actinomycetota
GGC
Ala
>WENV180147187
OAUG01001932
16400
Actinomycetota
GAG
Leu
>WENV180147022
OAUG01000154
201717
Actinomycetota
CTT
Lys
>WENV180147176
OAUG01001470
201717
Actinomycetota
CTT
Lys
>WENV180147178
OAUG01001559
144600
Actinomycetota
TGG
Pro
>WENV180147171
OAUG01001194
235194
Actinomycetota
GTG
His
>WENV180147200
OAUG01002750
158720
Actinomycetota
ACG
Arg
>WENV180147145
OAUG01000820
411601
Actinomycetota
CCC
Gly
>WENV180147242
OAUG01022250
144826
Actinomycetota
GGG
Pro
>WENV180147174
OAUG01001270
23370
Actinomycetota
GCT
Ser
>WENV180147128
OAUG01000582
174149
Actinomycetota
GAT
Ile
>WENV180147223
OAUG01005541
338239
Actinomycetota
TTC
Glu
>WENV180147109
OAUG01000534
235174
Actinomycetota
TGC
Ala
>WENV180147129
OAUG01000582
235174
Actinomycetota
TGC
Ala
>WENV180147139
OAUG01000685
121510
Actinomycetota
TAA
Leu
>WENV180147070
OAUG01000251
356045
Actinomycetota
GAC
Val
>WENV180147153
OAUG01000922
44855
Actinomycetota
TGA
Ser
>WENV180147179
OAUG01001591
145345
Actinomycetota
TAC
Val
>WENV180147071
OAUG01000251
235199
Actinomycetota
CAC
Val
>WENV180147082
OAUG01000355
44862
Actinomycetota
CGA
Ser
>WENV180147181
OAUG01001637
313386
Actinomycetota
CGT
Thr
>WENV180147154
OAUG01000993
413665
Actinomycetota
TTG
Gln
>WENV180147068
OAUG01000251
254857
Actinomycetota
CCG
Arg
>WENV180147190
OAUG01002128
113703
Actinomycetota
TAG
Leu
>WENV180147157
OAUG01001014
144700
Actinomycetota
CAT
Met
>WENV180147199
OAUG01002682
45147
Actinomycetota
CGA
Ser
>WENV180147148
OAUG01000863
295695
Actinomycetota
CTC
Glu
>WENV180147149
OAUG01000863
338148
Actinomycetota
CTG
Gln
>WENV180147103
OAUG01000525
235148
Actinomycetota
GTT
Asn
>WENV180147104
OAUG01000525
235148
Actinomycetota
GTT
Asn
>WENV180147105
OAUG01000525
235148
Actinomycetota
GTT
Asn
>WENV180147086
OAUG01000396
53078
Actinomycetota
GGA
Ser
>WENV180147158
OAUG01001016
53078
Actinomycetota
GGA
Ser
>WENV180147202
OAUG01002944
237792
Actinomycetota
CCT
Arg
>WENV180147175
OAUG01001347
113702
Actinomycetota
TAA
Leu
>WENV180147130
OAUG01000598
144825
Actinomycetota
CAT
Met
>WENV180147043
OAUG01000179
235348
Actinomycetota
CCT
Arg
>WENV180147165
OAUG01001120
237794
Actinomycetota
CCG
Arg
>WENV180147110
OAUG01000539
411554
Actinomycetota
CCC
Gly
>WENV180147182
OAUG01001637
113601
Actinomycetota
TAG
Leu
>WENV180147192
OAUG01002209
144595
Actinomycetota
CAA
Leu
>WENV180147210
OAUG01004147
144595
Actinomycetota
CAA
Leu
>WENV180147135
OAUG01000636
51286
Actinomycetota
TGA
Ser
>WENV180147189
OAUG01002128
235121
Actinomycetota
CGT
Thr
>WENV180147162
OAUG01001058
17009
Actinomycetota
GAG
Leu
>WENV180147161
OAUG01001045
80622
Actinomycetota
CAG
Leu
>WENV180147198
OAUG01002446
163948
Actinomycetota
CAT
Met
>WENV180147194
OAUG01002286
235173
Actinomycetota
GGC
Ala
>WENV180147172
OAUG01001236
144660
Actinomycetota
TAC
Val
>WENV180147156
OAUG01001014
95593
Actinomycetota
>WENV180147207
OAUG01003221
95593
Actinomycetota
>WENV180147127
OAUG01000574
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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