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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180154170
OAUS01029198
154063
Bacillota
CGG
Pro
>WENV180153961
OAUS01003696
267649
Bacillota
TAC
Val
>WENV180154017
OAUS01006174
267649
Bacillota
TAC
Val
>WENV180153631
OAUS01000498
235134
Bacillota
GAA
Phe
>WENV180154206
OAUS01042341
338152
Bacillota
TTC
Glu
>WENV180153697
OAUS01000818
340263
Bacillota
TTC
Glu
>WENV180154216
OAUS01045667
340263
Bacillota
TTC
Glu
>WENV180153802
OAUS01001394
148239
Bacillota
TCT
Arg
>WENV180154280
OAUS01069567
235154
Bacillota
GTT
Asn
>WENV180153699
OAUS01000818
148348
Bacillota
GTC
Asp
>WENV180153757
OAUS01001124
148348
Bacillota
GTC
Asp
>WENV180153351
OAUS01000028
37071
Bacillota
TGA
Ser
>WENV180153375
OAUS01000048
37071
Bacillota
TGA
Ser
>WENV180154282
OAUS01069567
429443
Bacillota
GCA
Cys
>WENV180154189
OAUS01035898
302150
Bacillota
TAC
Val
>WENV180153959
OAUS01003605
307003
Bacillota
TGC
Ala
>WENV180154031
OAUS01006586
307003
Bacillota
TGC
Ala
>WENV180153429
OAUS01000123
59312
Bacillota
CAG
Leu
>WENV180153748
OAUS01001094
239080
Bacillota
CTG
Gln
>WENV180154242
OAUS01055780
238910
Bacillota
CTT
Lys
>WENV180153379
OAUS01000057
338147
Bacillota
CTC
Glu
>WENV180153380
OAUS01000058
338147
Bacillota
CTC
Glu
>WENV180153641
OAUS01000511
338147
Bacillota
CTC
Glu
>WENV180153906
OAUS01002574
338147
Bacillota
CTC
Glu
>WENV180154322
OAUS01113162
235150
Bacillota
TGC
Ala
>WENV180154020
OAUS01006234
235137
Bacillota
TGC
Ala
>WENV180153314
OAUS01000008
340802
Bacillota
TTG
Gln
>WENV180153437
OAUS01000127
235114
Bacillota
TTT
Lys
>WENV180153714
OAUS01000876
235114
Bacillota
TTT
Lys
>WENV180154112
OAUS01015590
341763
Bacillota
CTC
Glu
>WENV180153665
OAUS01000628
429429
Bacillota
CCA
Trp
>WENV180153905
OAUS01002560
429429
Bacillota
CCA
Trp
>WENV180154145
OAUS01021774
429429
Bacillota
CCA
Trp
>WENV180154175
OAUS01031102
429429
Bacillota
CCA
Trp
>WENV180153387
OAUS01000067
313454
Bacillota
GAA
Phe
>WENV180153445
OAUS01000136
313454
Bacillota
GAA
Phe
>WENV180154049
OAUS01007687
313454
Bacillota
GAA
Phe
>WENV180154101
OAUS01013314
313454
Bacillota
GAA
Phe
>WENV180154269
OAUS01064422
41154
Bacillota
TAA
Leu
>WENV180153427
OAUS01000123
44859
Bacillota
AAG
Leu
>WENV180153428
OAUS01000123
44859
Bacillota
AAG
Leu
>WENV180153700
OAUS01000818
239076
Bacillota
GAA
Phe
>WENV180153758
OAUS01001124
239076
Bacillota
GAA
Phe
>WENV180153653
OAUS01000541
235697
Bacillota
GTT
Asn
>WENV180153462
OAUS01000152
235079
Bacillota
GAA
Phe
>WENV180153652
OAUS01000541
296878
Bacillota
GTT
Asn
>WENV180153705
OAUS01000841
340265
Bacillota
GCC
Gly
>WENV180153706
OAUS01000841
340265
Bacillota
GCC
Gly
>WENV180153717
OAUS01000881
340265
Bacillota
GCC
Gly
>WENV180154194
OAUS01036938
235087
Bacillota
TGC
Ala
>WENV180153535
OAUS01000260
37269
Bacillota
TGA
Ser
>WENV180154005
OAUS01005479
155089
Bacillota
CAT
Met
>WENV180153602
OAUS01000440
287000
Bacillota
GTT
Asn
>WENV180154205
OAUS01042341
287000
Bacillota
GTT
Asn
>WENV180154254
OAUS01058317
287000
Bacillota
GTT
Asn
>WENV180153444
OAUS01000136
169968
Bacillota
CAT
Met
>WENV180154289
OAUS01074435
413152
Bacillota
TCC
Gly
>WENV180153421
OAUS01000109
162445
Bacillota
CAT
Met
>WENV180153423
OAUS01000109
162445
Bacillota
CAT
Met
>WENV180154287
OAUS01073518
201704
Bacillota
GAT
Ile
>WENV180153285
OAUS01000001
152492
Bacillota
GGG
Pro
>WENV180154188
OAUS01035898
144599
Bacillota
GTC
Asp
>WENV180153460
OAUS01000152
235078
Bacillota
TAC
Val
>WENV180153449
OAUS01000141
100326
Bacillota
GTA
Tyr
>WENV180153313
OAUS01000008
144610
Bacillota
GTG
His
>WENV180153435
OAUS01000127
144610
Bacillota
GTG
His
>WENV180154278
OAUS01069121
144610
Bacillota
GTG
His
>WENV180153632
OAUS01000498
240017
Bacillota
GCC
Gly
>WENV180154193
OAUS01036222
240017
Bacillota
GCC
Gly
>WENV180153629
OAUS01000498
263765
Bacillota
TAC
Val
>WENV180153754
OAUS01001097
313164
Bacillota
TTT
Lys
>WENV180154050
OAUS01007687
313164
Bacillota
TTT
Lys
>WENV180154080
OAUS01010112
419639
Bacillota
GCA
Cys
>WENV180154249
OAUS01056926
235289
Bacillota
GTT
Asn
>WENV180153698
OAUS01000818
304759
Bacillota
TAC
Val
>WENV180153701
OAUS01000818
304759
Bacillota
TAC
Val
>WENV180154217
OAUS01045667
304759
Bacillota
TAC
Val
>WENV180153459
OAUS01000150
235142
Bacillota
CTT
Lys
>WENV180153548
OAUS01000312
235142
Bacillota
CTT
Lys
>WENV180154313
OAUS01108679
59296
Bacillota
AAG
Leu
>WENV180153588
OAUS01000403
256380
Bacillota
>WENV180153751
OAUS01001097
147674
Bacillota
TCT
Arg
>WENV180153408
OAUS01000093
298620
Bacillota
CAT
Met
>WENV180154245
OAUS01056379
144652
Bacillota
GTC
Asp
>WENV180154062
OAUS01008846
247734
Bacillota
TGC
Ala
>WENV180153451
OAUS01000141
238974
Bacillota
GAA
Phe
>WENV180154316
OAUS01113025
238974
Bacillota
GAA
Phe
>WENV180153372
OAUS01000048
235113
Bacillota
GAA
Phe
>WENV180153713
OAUS01000876
235113
Bacillota
GAA
Phe
>WENV180153730
OAUS01000952
243098
Bacillota
GGT
Thr
>WENV180153868
OAUS01002144
243098
Bacillota
GGT
Thr
>WENV180153696
OAUS01000818
239078
Bacillota
TTT
Lys
>WENV180154215
OAUS01045667
239078
Bacillota
TTT
Lys
>WENV180153467
OAUS01000154
344240
Bacillota
GCC
Gly
>WENV180153475
OAUS01000161
344240
Bacillota
GCC
Gly
>WENV180154079
OAUS01010112
344240
Bacillota
GCC
Gly
>WENV180153474
OAUS01000161
196632
Bacillota
GTC
Asp
>WENV180153797
OAUS01001368
196632
Bacillota
GTC
Asp
>WENV180154077
OAUS01010112
196632
Bacillota
GTC
Asp
>WENV180153873
OAUS01002169
178024
Bacillota
TCT
Arg
>WENV180153312
OAUS01000008
157635
Bacillota
TCT
Arg
>WENV180153323
OAUS01000013
95563
Bacillota
GTA
Tyr
>WENV180153711
OAUS01000876
95563
Bacillota
GTA
Tyr
>WENV180153485
OAUS01000162
338127
Bacillota
TTG
Gln
>WENV180153627
OAUS01000496
114075
Bacillota
TAG
Leu
>WENV180153798
OAUS01001368
245344
Bacillota
GAA
Phe
>WENV180154078
OAUS01010112
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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