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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180161764
OAVF01000015
235146
Actinomycetota
CGT
Thr
>WENV180161854
OAVF01000128
235347
Actinomycetota
GGC
Ala
>WENV180161855
OAVF01000128
235347
Actinomycetota
GGC
Ala
>WENV180161752
OAVF01000010
201717
Actinomycetota
CTT
Lys
>WENV180161805
OAVF01000067
144600
Actinomycetota
TGG
Pro
>WENV180161793
OAVF01000041
235194
Actinomycetota
GTG
His
>WENV180161840
OAVF01000112
158720
Actinomycetota
ACG
Arg
>WENV180161841
OAVF01000112
158720
Actinomycetota
ACG
Arg
>WENV180161830
OAVF01000098
411601
Actinomycetota
CCC
Gly
>WENV180161811
OAVF01000068
144826
Actinomycetota
GGG
Pro
>WENV180161803
OAVF01000061
23370
Actinomycetota
GCT
Ser
>WENV180161861
OAVF01000178
174149
Actinomycetota
GAT
Ile
>WENV180161798
OAVF01000052
338239
Actinomycetota
TTC
Glu
>WENV180161862
OAVF01000178
235174
Actinomycetota
TGC
Ala
>WENV180161800
OAVF01000058
121510
Actinomycetota
TAA
Leu
>WENV180161760
OAVF01000015
356045
Actinomycetota
GAC
Val
>WENV180161808
OAVF01000068
356045
Actinomycetota
GAC
Val
>WENV180161842
OAVF01000114
44855
Actinomycetota
TGA
Ser
>WENV180161761
OAVF01000015
235199
Actinomycetota
CAC
Val
>WENV180161809
OAVF01000068
235199
Actinomycetota
CAC
Val
>WENV180161846
OAVF01000120
44862
Actinomycetota
CGA
Ser
>WENV180161762
OAVF01000015
313386
Actinomycetota
CGT
Thr
>WENV180161853
OAVF01000128
413665
Actinomycetota
TTG
Gln
>WENV180161753
OAVF01000010
254857
Actinomycetota
CCG
Arg
>WENV180161802
OAVF01000061
144700
Actinomycetota
CAT
Met
>WENV180161870
OAVF01000273
295695
Actinomycetota
CTC
Glu
>WENV180161871
OAVF01000273
338148
Actinomycetota
CTG
Gln
>WENV180161856
OAVF01000130
235148
Actinomycetota
GTT
Asn
>WENV180161857
OAVF01000130
235148
Actinomycetota
GTT
Asn
>WENV180161858
OAVF01000130
235148
Actinomycetota
GTT
Asn
>WENV180161750
OAVF01000010
53078
Actinomycetota
GGA
Ser
>WENV180161783
OAVF01000035
144825
Actinomycetota
CAT
Met
>WENV180161784
OAVF01000035
235348
Actinomycetota
CCT
Arg
>WENV180161900
OAVF01004639
411554
Actinomycetota
CCC
Gly
>WENV180161763
OAVF01000015
113601
Actinomycetota
TAG
Leu
>WENV180161804
OAVF01000067
144595
Actinomycetota
CAA
Leu
>WENV180161829
OAVF01000098
80622
Actinomycetota
CAG
Leu
>WENV180161765
OAVF01000017
16222
Actinomycetota
GAG
Leu
>WENV180161767
OAVF01000021
144660
Actinomycetota
TAC
Val
>WENV180161801
OAVF01000061
95593
Actinomycetota
>WENV180161792
OAVF01000041
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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