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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180166347
OAVM01000534
235097
Bacteroidota
TTT
Lys
>WENV180166009
OAVM01000007
126641
Bacteroidota
TAC
Val
>WENV180166010
OAVM01000007
126641
Bacteroidota
TAC
Val
>WENV180166237
OAVM01000187
338132
Bacteroidota
GCA
Cys
>WENV180166179
OAVM01000136
280660
Bacteroidota
CCA
Trp
>WENV180166070
OAVM01000030
301449
Bacteroidota
CGG
Pro
>WENV180166007
OAVM01000005
80607
Bacteroidota
GTA
Tyr
>WENV180165999
OAVM01000001
338165
Bacteroidota
GGT
Thr
>WENV180166006
OAVM01000004
425638
Bacteroidota
CTG
Gln
>WENV180166162
OAVM01000111
239647
Bacteroidota
TTT
Lys
>WENV180165998
OAVM01000001
94703
Bacteroidota
GTA
Tyr
>WENV180166274
OAVM01000253
56823
Bacteroidota
TGA
Ser
>WENV180166183
OAVM01000151
55270
Bacteroidota
TGA
Ser
>WENV180166111
OAVM01000057
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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