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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180169950
OAVU01000004
235097
Bacteroidota
TTT
Lys
>WENV180169978
OAVU01000026
235097
Bacteroidota
TTT
Lys
>WENV180169949
OAVU01000003
235102
Bacteroidota
CGT
Thr
>WENV180170000
OAVU01000084
436206
Bacteroidota
TTG
Gln
>WENV180169948
OAVU01000003
338124
Bacteroidota
CCG
Arg
>WENV180169944
OAVU01000001
338132
Bacteroidota
GCA
Cys
>WENV180170008
OAVU01000136
193809
Bacteroidota
CAT
Met
>WENV180169974
OAVU01000016
301449
Bacteroidota
CGG
Pro
>WENV180169957
OAVU01000010
141414
Bacteroidota
GGG
Pro
>WENV180169962
OAVU01000012
144656
Bacteroidota
GTG
His
>WENV180169961
OAVU01000011
235207
Bacteroidota
CAT
Met
>WENV180169951
OAVU01000006
80607
Bacteroidota
GTA
Tyr
>WENV180169965
OAVU01000013
80607
Bacteroidota
GTA
Tyr
>WENV180169984
OAVU01000037
113604
Bacteroidota
>WENV180169987
OAVU01000037
113604
Bacteroidota
>WENV180169970
OAVU01000014
144590
Bacteroidota
GTT
Asn
>WENV180169971
OAVU01000014
144590
Bacteroidota
GTT
Asn
>WENV180169954
OAVU01000008
95559
Bacteroidota
TAG
Leu
>WENV180169969
OAVU01000014
44852
Bacteroidota
TAA
Leu
>WENV180169980
OAVU01000028
56823
Bacteroidota
TGA
Ser
>WENV180169992
OAVU01000046
56823
Bacteroidota
TGA
Ser
>WENV180169963
OAVU01000012
16224
Bacteroidota
GGA
Ser
>WENV180169956
OAVU01000010
16220
Bacteroidota
GGA
Ser
>WENV180169947
OAVU01000002
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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