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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180173253
OAVZ01000107
243647
Bacillota
TTT
Lys
>WENV180173320
OAVZ01000638
16842
Bacillota
CGA
Ser
>WENV180173373
OAVZ01011970
339825
Bacillota
CCG
Arg
>WENV180173217
OAVZ01000058
16834
Bacillota
GCT
Ser
>WENV180173214
OAVZ01000054
243646
Bacillota
GTT
Asn
>WENV180173252
OAVZ01000107
243646
Bacillota
GTT
Asn
>WENV180173317
OAVZ01000635
243646
Bacillota
GTT
Asn
>WENV180173256
OAVZ01000110
114002
Bacillota
CAA
Leu
>WENV180173262
OAVZ01000115
37437
Bacillota
TAA
Leu
>WENV180173360
OAVZ01004559
339935
Bacillota
GTT
Asn
>WENV180173216
OAVZ01000054
243612
Bacillota
TAC
Val
>WENV180173255
OAVZ01000107
243612
Bacillota
TAC
Val
>WENV180173319
OAVZ01000635
243612
Bacillota
TAC
Val
>WENV180173349
OAVZ01001252
147135
Bacillota
ACG
Arg
>WENV180173199
OAVZ01000035
342895
Bacillota
CAT
Met
>WENV180173272
OAVZ01000152
194150
Bacillota
TGG
Pro
>WENV180173211
OAVZ01000049
250349
Bacillota
GAA
Phe
>WENV180173259
OAVZ01000115
250349
Bacillota
GAA
Phe
>WENV180173291
OAVZ01000256
235701
Bacillota
TTT
Lys
>WENV180173210
OAVZ01000049
235197
Bacillota
GTC
Asp
>WENV180173258
OAVZ01000115
235197
Bacillota
GTC
Asp
>WENV180173251
OAVZ01000107
368876
Bacillota
GCC
Gly
>WENV180173260
OAVZ01000115
368876
Bacillota
GCC
Gly
>WENV180173316
OAVZ01000635
368876
Bacillota
GCC
Gly
>WENV180173289
OAVZ01000256
243613
Bacillota
GTG
His
>WENV180173247
OAVZ01000100
152491
Bacillota
CAT
Met
>WENV180173243
OAVZ01000100
273029
Bacillota
TGT
Thr
>WENV180173246
OAVZ01000100
281472
Bacillota
GGT
Thr
>WENV180173274
OAVZ01000152
178024
Bacillota
TCT
Arg
>WENV180173228
OAVZ01000077
413657
Bacillota
CCC
Gly
>WENV180173290
OAVZ01000256
343027
Bacillota
TTG
Gln
>WENV180173370
OAVZ01010507
37258
Bacillota
AAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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