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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180174914
OAWB01000755
24650
Bacillota
TAA
Leu
>WENV180174720
OAWB01000149
243647
Bacillota
TTT
Lys
>WENV180175219
OAWB01025203
116171
Bacillota
TAG
Leu
>WENV180174652
OAWB01000097
16842
Bacillota
CGA
Ser
>WENV180175129
OAWB01009755
37213
Bacillota
TGA
Ser
>WENV180174949
OAWB01001226
144612
Bacillota
TCT
Arg
>WENV180174538
OAWB01000002
267649
Bacillota
TAC
Val
>WENV180174540
OAWB01000002
267649
Bacillota
TAC
Val
>WENV180174693
OAWB01000130
267649
Bacillota
TAC
Val
>WENV180175059
OAWB01005400
267649
Bacillota
TAC
Val
>WENV180175061
OAWB01005460
267649
Bacillota
TAC
Val
>WENV180175116
OAWB01008231
267649
Bacillota
TAC
Val
>WENV180175164
OAWB01016116
267649
Bacillota
TAC
Val
>WENV180175131
OAWB01010143
10560
Bacillota
GGA
Ser
>WENV180174939
OAWB01001040
235098
Bacillota
GAC
Val
>WENV180174964
OAWB01001478
235098
Bacillota
GAC
Val
>WENV180175052
OAWB01004571
193699
Bacillota
CAT
Met
>WENV180174978
OAWB01001596
44854
Bacillota
TGA
Ser
>WENV180175254
OAWB01033687
356488
Bacillota
TGT
Thr
>WENV180175233
OAWB01030298
235154
Bacillota
GTT
Asn
>WENV180175182
OAWB01019566
246023
Bacillota
TGC
Ala
>WENV180175215
OAWB01023776
235137
Bacillota
TGC
Ala
>WENV180174894
OAWB01000660
340802
Bacillota
TTG
Gln
>WENV180175108
OAWB01007554
16235
Bacillota
>WENV180175310
OAWB01055437
241761
Bacillota
TAC
Val
>WENV180175093
OAWB01006239
338143
Bacillota
CTC
Glu
>WENV180175205
OAWB01021688
338143
Bacillota
CTC
Glu
>WENV180175214
OAWB01023744
338143
Bacillota
CTC
Glu
>WENV180175172
OAWB01016899
341763
Bacillota
CTC
Glu
>WENV180175204
OAWB01021631
16524
Bacillota
CGA
Ser
>WENV180174692
OAWB01000130
144668
Bacillota
GTC
Asp
>WENV180174912
OAWB01000755
144668
Bacillota
GTC
Asp
>WENV180174678
OAWB01000119
182792
Bacillota
GTC
Asp
>WENV180175072
OAWB01005779
182792
Bacillota
GTC
Asp
>WENV180175138
OAWB01010932
182792
Bacillota
GTC
Asp
>WENV180174750
OAWB01000183
16834
Bacillota
GCT
Ser
>WENV180175030
OAWB01003391
11034
Bacillota
GGA
Ser
>WENV180174677
OAWB01000119
235117
Bacillota
TAC
Val
>WENV180175236
OAWB01030471
156937
Bacillota
GTG
His
>WENV180174642
OAWB01000090
114002
Bacillota
CAA
Leu
>WENV180175314
OAWB01058476
342736
Bacillota
TTG
Gln
>WENV180174548
OAWB01000003
37437
Bacillota
TAA
Leu
>WENV180174679
OAWB01000119
235079
Bacillota
GAA
Phe
>WENV180175136
OAWB01010932
235079
Bacillota
GAA
Phe
>WENV180174722
OAWB01000149
243612
Bacillota
TAC
Val
>WENV180174726
OAWB01000149
243612
Bacillota
TAC
Val
>WENV180174919
OAWB01000812
338149
Bacillota
CTC
Glu
>WENV180174994
OAWB01002017
245298
Bacillota
CGG
Pro
>WENV180175062
OAWB01005460
155089
Bacillota
CAT
Met
>WENV180175220
OAWB01025249
155089
Bacillota
CAT
Met
>WENV180175194
OAWB01020494
411585
Bacillota
GCA
Cys
>WENV180174728
OAWB01000151
147135
Bacillota
ACG
Arg
>WENV180174993
OAWB01002017
411547
Bacillota
CTG
Gln
>WENV180175009
OAWB01002516
411547
Bacillota
CTG
Gln
>WENV180174979
OAWB01001596
4624
Bacillota
GCT
Ser
>WENV180174584
OAWB01000029
342895
Bacillota
CAT
Met
>WENV180175253
OAWB01033687
193665
Bacillota
GTC
Asp
>WENV180175073
OAWB01005779
235095
Bacillota
GGT
Thr
>WENV180175222
OAWB01027407
235095
Bacillota
GGT
Thr
>WENV180174657
OAWB01000097
194150
Bacillota
TGG
Pro
>WENV180175248
OAWB01032210
239832
Bacillota
TGT
Thr
>WENV180174545
OAWB01000003
250349
Bacillota
GAA
Phe
>WENV180174655
OAWB01000097
250349
Bacillota
GAA
Phe
>WENV180174999
OAWB01002235
411549
Bacillota
TTG
Gln
>WENV180175046
OAWB01004272
59296
Bacillota
AAG
Leu
>WENV180175192
OAWB01020494
144767
Bacillota
GTG
His
>WENV180175040
OAWB01003907
148188
Bacillota
CCG
Arg
>WENV180175070
OAWB01005756
80612
Bacillota
GTA
Tyr
>WENV180174698
OAWB01000130
235127
Bacillota
TTT
Lys
>WENV180174760
OAWB01000189
235127
Bacillota
TTT
Lys
>WENV180174544
OAWB01000003
235197
Bacillota
GTC
Asp
>WENV180174654
OAWB01000097
235197
Bacillota
GTC
Asp
>WENV180174546
OAWB01000003
368876
Bacillota
GCC
Gly
>WENV180174718
OAWB01000149
368876
Bacillota
GCC
Gly
>WENV180174723
OAWB01000149
368876
Bacillota
GCC
Gly
>WENV180174757
OAWB01000189
147674
Bacillota
TCT
Arg
>WENV180174960
OAWB01001389
235124
Bacillota
TGG
Pro
>WENV180175268
OAWB01035775
163753
Bacillota
TGG
Pro
>WENV180174834
OAWB01000346
338129
Bacillota
TGT
Thr
>WENV180174860
OAWB01000467
243613
Bacillota
GTG
His
>WENV180175043
OAWB01004127
144583
Bacillota
ACG
Arg
>WENV180175255
OAWB01033687
102996
Bacillota
GTA
Tyr
>WENV180175071
OAWB01005779
235171
Bacillota
CCA
Trp
>WENV180175195
OAWB01020494
144833
Bacillota
ACG
Arg
>WENV180174920
OAWB01000812
144621
Bacillota
GTT
Asn
>WENV180174990
OAWB01001887
144621
Bacillota
GTT
Asn
>WENV180175267
OAWB01035775
235292
Bacillota
CCA
Trp
>WENV180174888
OAWB01000644
152491
Bacillota
CAT
Met
>WENV180174963
OAWB01001464
58712
Bacillota
CAG
Leu
>WENV180175271
OAWB01036253
144762
Bacillota
TCT
Arg
>WENV180175045
OAWB01004239
245296
Bacillota
CCC
Gly
>WENV180175280
OAWB01037667
272992
Bacillota
CTT
Lys
>WENV180174884
OAWB01000644
273029
Bacillota
TGT
Thr
>WENV180174887
OAWB01000644
281472
Bacillota
GGT
Thr
>WENV180174906
OAWB01000743
144594
Bacillota
CAC
Val
>WENV180174640
OAWB01000085
413657
Bacillota
CCC
Gly
>WENV180175025
OAWB01003252
272488
Bacillota
GAA
Phe
>WENV180175042
OAWB01004031
238945
Bacillota
GCC
Gly
>WENV180174676
OAWB01000119
249259
Bacillota
GCC
Gly
>WENV180174988
OAWB01001784
249259
Bacillota
GCC
Gly
>WENV180175137
OAWB01010932
249259
Bacillota
GCC
Gly
>WENV180174719
OAWB01000149
287034
Bacillota
GTT
Asn
>WENV180174724
OAWB01000149
287034
Bacillota
GTT
Asn
>WENV180174861
OAWB01000467
343027
Bacillota
TTG
Gln
>WENV180175218
OAWB01024910
338131
Bacillota
GCC
Gly
>WENV180175330
OAWB01064448
338131
Bacillota
GCC
Gly
>WENV180174984
OAWB01001665
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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