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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180174889
OAWB01000645
119661
Verrucomicrobiota
CAA
Leu
>WENV180174870
OAWB01000494
155256
Verrucomicrobiota
TCT
Arg
>WENV180174717
OAWB01000148
246701
Verrucomicrobiota
TTT
Lys
>WENV180174681
OAWB01000120
345141
Verrucomicrobiota
TTG
Gln
>WENV180174751
OAWB01000186
345133
Verrucomicrobiota
GAC
Val
>WENV180174902
OAWB01000685
82054
Verrucomicrobiota
GTA
Tyr
>WENV180174711
OAWB01000142
246677
Verrucomicrobiota
CTT
Lys
>WENV180174712
OAWB01000142
246677
Verrucomicrobiota
CTT
Lys
>WENV180174746
OAWB01000174
344844
Verrucomicrobiota
GCA
Cys
>WENV180174632
OAWB01000078
155264
Verrucomicrobiota
GGG
Pro
>WENV180174644
OAWB01000091
344845
Verrucomicrobiota
CTG
Gln
>WENV180174643
OAWB01000091
128202
Verrucomicrobiota
GTC
Asp
>WENV180174708
OAWB01000138
128202
Verrucomicrobiota
GTC
Asp
>WENV180174943
OAWB01001103
414625
Verrucomicrobiota
CCC
Gly
>WENV180174671
OAWB01000115
46246
Verrucomicrobiota
TGA
Ser
>WENV180174785
OAWB01000217
97755
Verrucomicrobiota
TAG
Leu
>WENV180174747
OAWB01000174
246700
Verrucomicrobiota
TTC
Glu
>WENV180174899
OAWB01000684
246700
Verrucomicrobiota
TTC
Glu
>WENV180174817
OAWB01000268
246687
Verrucomicrobiota
CGC
Ala
>WENV180174942
OAWB01001103
419909
Verrucomicrobiota
TCC
Gly
>WENV180174602
OAWB01000047
344841
Verrucomicrobiota
CAC
Val
>WENV180174864
OAWB01000480
60880
Verrucomicrobiota
CAG
Leu
>WENV180174786
OAWB01000218
82056
Verrucomicrobiota
TAA
Leu
>WENV180174710
OAWB01000142
344842
Verrucomicrobiota
CGT
Thr
>WENV180174707
OAWB01000138
170105
Verrucomicrobiota
CAT
Met
>WENV180174704
OAWB01000134
287733
Verrucomicrobiota
CCA
Trp
>WENV180174950
OAWB01001242
345123
Verrucomicrobiota
TGT
Thr
>WENV180174650
OAWB01000094
345110
Verrucomicrobiota
CCT
Arg
>WENV180174900
OAWB01000684
344839
Verrucomicrobiota
GTG
His
>WENV180174819
OAWB01000272
7274
Verrucomicrobiota
CGA
Ser
>WENV180174787
OAWB01000218
246260
Verrucomicrobiota
>WENV180174709
OAWB01000142
155268
Verrucomicrobiota
CGG
Pro
>WENV180174745
OAWB01000174
82181
Verrucomicrobiota
AAG
Leu
>WENV180174934
OAWB01000937
246728
Verrucomicrobiota
GAA
Phe
>WENV180174788
OAWB01000218
7256
Verrucomicrobiota
GCT
Ser
>WENV180174670
OAWB01000115
345115
Verrucomicrobiota
CAT
Met
>WENV180174752
OAWB01000186
345119
Verrucomicrobiota
TAC
Val
>WENV180174754
OAWB01000188
345124
Verrucomicrobiota
GTT
Asn
>WENV180174579
OAWB01000026
17023
Verrucomicrobiota
GGA
Ser
>WENV180174601
OAWB01000047
368497
Verrucomicrobiota
GCC
Gly
>WENV180174672
OAWB01000115
368497
Verrucomicrobiota
GCC
Gly
>WENV180174933
OAWB01000936
345142
Verrucomicrobiota
CCG
Arg
>WENV180174901
OAWB01000684
246709
Verrucomicrobiota
CAT
Met
>WENV180174935
OAWB01000937
154693
Verrucomicrobiota
TGG
Pro
>WENV180174703
OAWB01000134
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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