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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180187784
OAWW01000793
24650
Bacillota
TAA
Leu
>WENV180188275
OAWW01020434
361659
Bacillota
GCC
Gly
>WENV180188133
OAWW01005856
202812
Bacillota
CAT
Met
>WENV180187581
OAWW01000328
267649
Bacillota
TAC
Val
>WENV180187823
OAWW01000935
267649
Bacillota
TAC
Val
>WENV180188123
OAWW01005390
267649
Bacillota
TAC
Val
>WENV180187606
OAWW01000361
235134
Bacillota
GAA
Phe
>WENV180187502
OAWW01000168
338152
Bacillota
TTC
Glu
>WENV180187468
OAWW01000137
148239
Bacillota
TCT
Arg
>WENV180188237
OAWW01014671
235154
Bacillota
GTT
Asn
>WENV180188068
OAWW01003854
246023
Bacillota
TGC
Ala
>WENV180188023
OAWW01002854
307003
Bacillota
TGC
Ala
>WENV180188198
OAWW01009892
307003
Bacillota
TGC
Ala
>WENV180188251
OAWW01016367
235150
Bacillota
TGC
Ala
>WENV180188274
OAWW01020434
114359
Bacillota
TAG
Leu
>WENV180188259
OAWW01018631
235137
Bacillota
TGC
Ala
>WENV180187979
OAWW01002260
340802
Bacillota
TTG
Gln
>WENV180188226
OAWW01012472
340802
Bacillota
TTG
Gln
>WENV180187525
OAWW01000192
338143
Bacillota
CTC
Glu
>WENV180187938
OAWW01001922
338143
Bacillota
CTC
Glu
>WENV180188070
OAWW01003854
341763
Bacillota
CTC
Glu
>WENV180188357
OAWW01047456
144668
Bacillota
GTC
Asp
>WENV180187637
OAWW01000429
429429
Bacillota
CCA
Trp
>WENV180187914
OAWW01001649
429429
Bacillota
CCA
Trp
>WENV180187963
OAWW01002132
429429
Bacillota
CCA
Trp
>WENV180187424
OAWW01000098
313454
Bacillota
GAA
Phe
>WENV180187576
OAWW01000316
313454
Bacillota
GAA
Phe
>WENV180187665
OAWW01000463
313454
Bacillota
GAA
Phe
>WENV180187411
OAWW01000094
41154
Bacillota
TAA
Leu
>WENV180187507
OAWW01000168
41154
Bacillota
TAA
Leu
>WENV180188292
OAWW01025594
186380
Bacillota
GTC
Asp
>WENV180187469
OAWW01000137
156937
Bacillota
GTG
His
>WENV180188157
OAWW01007290
338550
Bacillota
>WENV180188293
OAWW01025663
392638
Bacillota
TGT
Thr
>WENV180187337
OAWW01000036
149041
Bacillota
GTC
Asp
>WENV180187619
OAWW01000389
37269
Bacillota
TGA
Ser
>WENV180187824
OAWW01000935
155089
Bacillota
CAT
Met
>WENV180187356
OAWW01000044
287000
Bacillota
GTT
Asn
>WENV180187501
OAWW01000168
287000
Bacillota
GTT
Asn
>WENV180187423
OAWW01000098
169968
Bacillota
CAT
Met
>WENV180187596
OAWW01000341
169968
Bacillota
CAT
Met
>WENV180188167
OAWW01008242
413152
Bacillota
TCC
Gly
>WENV180187312
OAWW01000026
162445
Bacillota
CAT
Met
>WENV180187314
OAWW01000026
162445
Bacillota
CAT
Met
>WENV180188067
OAWW01003854
201704
Bacillota
GAT
Ile
>WENV180187460
OAWW01000130
152492
Bacillota
GGG
Pro
>WENV180188319
OAWW01032945
411585
Bacillota
GCA
Cys
>WENV180187978
OAWW01002260
144610
Bacillota
GTG
His
>WENV180187331
OAWW01000032
240017
Bacillota
GCC
Gly
>WENV180187607
OAWW01000361
240017
Bacillota
GCC
Gly
>WENV180187330
OAWW01000032
263765
Bacillota
TAC
Val
>WENV180187604
OAWW01000361
263765
Bacillota
TAC
Val
>WENV180188291
OAWW01025594
263765
Bacillota
TAC
Val
>WENV180187577
OAWW01000316
313164
Bacillota
TTT
Lys
>WENV180187693
OAWW01000497
313164
Bacillota
TTT
Lys
>WENV180187735
OAWW01000629
313164
Bacillota
TTT
Lys
>WENV180188065
OAWW01003815
313164
Bacillota
TTT
Lys
>WENV180188116
OAWW01005188
313164
Bacillota
TTT
Lys
>WENV180188227
OAWW01012472
313164
Bacillota
TTT
Lys
>WENV180187706
OAWW01000528
18852
Bacillota
GCT
Ser
>WENV180187339
OAWW01000036
239832
Bacillota
TGT
Thr
>WENV180187957
OAWW01002072
419639
Bacillota
GCA
Cys
>WENV180187710
OAWW01000543
245386
Bacillota
CCA
Trp
>WENV180187738
OAWW01000642
59296
Bacillota
AAG
Leu
>WENV180188360
OAWW01049035
237846
Bacillota
GCC
Gly
>WENV180188294
OAWW01025663
110221
Bacillota
GTA
Tyr
>WENV180187754
OAWW01000708
147674
Bacillota
TCT
Arg
>WENV180188297
OAWW01025663
163943
Bacillota
GTC
Asp
>WENV180188269
OAWW01020434
411739
Bacillota
TCC
Gly
>WENV180188273
OAWW01020434
237963
Bacillota
TTT
Lys
>WENV180188270
OAWW01020434
201667
Bacillota
TCT
Arg
>WENV180188295
OAWW01025663
436750
Bacillota
TCC
Gly
>WENV180188271
OAWW01020434
279635
Bacillota
GTG
His
>WENV180188063
OAWW01003815
144672
Bacillota
TCT
Arg
>WENV180188249
OAWW01016178
247734
Bacillota
TGC
Ala
>WENV180188290
OAWW01025594
353527
Bacillota
TTC
Glu
>WENV180188316
OAWW01032945
144762
Bacillota
TCT
Arg
>WENV180187416
OAWW01000096
152497
Bacillota
GTC
Asp
>WENV180187954
OAWW01002072
152497
Bacillota
GTC
Asp
>WENV180187977
OAWW01002260
157635
Bacillota
TCT
Arg
>WENV180187707
OAWW01000530
343021
Bacillota
CAT
Met
>WENV180187548
OAWW01000247
152018
Bacillota
CCT
Arg
>WENV180187318
OAWW01000028
272488
Bacillota
GAA
Phe
>WENV180187597
OAWW01000341
272488
Bacillota
GAA
Phe
>WENV180187682
OAWW01000487
413179
Bacillota
CCC
Gly
>WENV180187488
OAWW01000153
338131
Bacillota
GCC
Gly
>WENV180187646
OAWW01000443
338131
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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