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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180188399
OAWX01000003
235097
Bacteroidota
TTT
Lys
>WENV180188442
OAWX01000037
235097
Bacteroidota
TTT
Lys
>WENV180188455
OAWX01000053
235102
Bacteroidota
CGT
Thr
>WENV180188583
OAWX01000409
338155
Bacteroidota
CTC
Glu
>WENV180188439
OAWX01000032
150845
Bacteroidota
GTC
Asp
>WENV180188508
OAWX01000180
343138
Bacteroidota
CCT
Arg
>WENV180188489
OAWX01000119
48053
Bacteroidota
TGA
Ser
>WENV180188505
OAWX01000172
48053
Bacteroidota
TGA
Ser
>WENV180188535
OAWX01000253
48053
Bacteroidota
TGA
Ser
>WENV180189123
OAWX01007935
48053
Bacteroidota
TGA
Ser
>WENV180188437
OAWX01000026
415410
Bacteroidota
TTG
Gln
>WENV180188686
OAWX01000786
415410
Bacteroidota
TTG
Gln
>WENV180188422
OAWX01000015
338124
Bacteroidota
CCG
Arg
>WENV180188496
OAWX01000149
126641
Bacteroidota
TAC
Val
>WENV180188564
OAWX01000326
338132
Bacteroidota
GCA
Cys
>WENV180188581
OAWX01000408
144933
Bacteroidota
TCT
Arg
>WENV180188684
OAWX01000776
144933
Bacteroidota
TCT
Arg
>WENV180188470
OAWX01000075
144656
Bacteroidota
GTG
His
>WENV180188542
OAWX01000263
235207
Bacteroidota
CAT
Met
>WENV180188773
OAWX01001480
144596
Bacteroidota
GGC
Ala
>WENV180188411
OAWX01000010
80607
Bacteroidota
GTA
Tyr
>WENV180188603
OAWX01000461
80607
Bacteroidota
GTA
Tyr
>WENV180188893
OAWX01002316
80607
Bacteroidota
GTA
Tyr
>WENV180189349
OAWX01067111
80607
Bacteroidota
GTA
Tyr
>WENV180188621
OAWX01000556
113604
Bacteroidota
>WENV180189354
OAWX01067595
144590
Bacteroidota
GTT
Asn
>WENV180188449
OAWX01000046
95559
Bacteroidota
TAG
Leu
>WENV180188431
OAWX01000023
419272
Bacteroidota
CTG
Gln
>WENV180188407
OAWX01000009
144655
Bacteroidota
GGC
Ala
>WENV180188396
OAWX01000002
44852
Bacteroidota
TAA
Leu
>WENV180188894
OAWX01002316
338165
Bacteroidota
GGT
Thr
>WENV180188544
OAWX01000272
16224
Bacteroidota
GGA
Ser
>WENV180188432
OAWX01000023
16220
Bacteroidota
GGA
Ser
>WENV180188758
OAWX01001384
338125
Bacteroidota
CCT
Arg
>WENV180188423
OAWX01000017
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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