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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180219817
OBAS01003857
235146
Actinomycetota
CGT
Thr
>WENV180219730
OBAS01002566
235347
Actinomycetota
GGC
Ala
>WENV180219731
OBAS01002566
235347
Actinomycetota
GGC
Ala
>WENV180219636
OBAS01001252
201717
Actinomycetota
CTT
Lys
>WENV180219657
OBAS01001471
144600
Actinomycetota
TGG
Pro
>WENV180219949
OBAS01007293
235194
Actinomycetota
GTG
His
>WENV180220040
OBAS01010990
158720
Actinomycetota
ACG
Arg
>WENV180219581
OBAS01000966
411601
Actinomycetota
CCC
Gly
>WENV180219955
OBAS01007514
144826
Actinomycetota
GGG
Pro
>WENV180219782
OBAS01003334
23370
Actinomycetota
GCT
Ser
>WENV180219530
OBAS01000678
174149
Actinomycetota
GAT
Ile
>WENV180219913
OBAS01006098
338239
Actinomycetota
TTC
Glu
>WENV180219531
OBAS01000678
235174
Actinomycetota
TGC
Ala
>WENV180219904
OBAS01005817
121510
Actinomycetota
TAA
Leu
>WENV180219747
OBAS01002717
356045
Actinomycetota
GAC
Val
>WENV180219748
OBAS01002717
235199
Actinomycetota
CAC
Val
>WENV180219521
OBAS01000653
44862
Actinomycetota
CGA
Ser
>WENV180219566
OBAS01000859
367535
Actinomycetota
CTG
Gln
>WENV180219825
OBAS01004049
413665
Actinomycetota
TTG
Gln
>WENV180220193
OBAS01024241
45154
Actinomycetota
TGA
Ser
>WENV180220440
OBAS01076234
254857
Actinomycetota
CCG
Arg
>WENV180219565
OBAS01000859
295695
Actinomycetota
CTC
Glu
>WENV180220564
OBAS01169774
235148
Actinomycetota
GTT
Asn
>WENV180219818
OBAS01003868
53078
Actinomycetota
GGA
Ser
>WENV180219811
OBAS01003763
144825
Actinomycetota
CAT
Met
>WENV180220563
OBAS01169729
338139
Actinomycetota
GTT
Asn
>WENV180219612
OBAS01001050
235348
Actinomycetota
CCT
Arg
>WENV180220346
OBAS01049763
144907
Actinomycetota
GGG
Pro
>WENV180220029
OBAS01010484
113601
Actinomycetota
TAG
Leu
>WENV180219771
OBAS01003100
144595
Actinomycetota
CAA
Leu
>WENV180220314
OBAS01042580
145343
Actinomycetota
GGG
Pro
>WENV180220403
OBAS01061693
145269
Actinomycetota
CAT
Met
>WENV180220028
OBAS01010484
235121
Actinomycetota
CGT
Thr
>WENV180219970
OBAS01007970
17009
Actinomycetota
GAG
Leu
>WENV180219884
OBAS01005379
80622
Actinomycetota
CAG
Leu
>WENV180220536
OBAS01141822
412834
Actinomycetota
GCA
Cys
>WENV180219781
OBAS01003312
243162
Actinomycetota
GTT
Asn
>WENV180219999
OBAS01009268
144660
Actinomycetota
TAC
Val
>WENV180219800
OBAS01003654
95593
Actinomycetota
>WENV180219544
OBAS01000739
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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