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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180220815
OBAW01023038
235102
Bacteroidota
CGT
Thr
>WENV180220672
OBAW01000446
144657
Bacteroidota
CGG
Pro
>WENV180220781
OBAW01009579
243025
Bacteroidota
CAT
Met
>WENV180220711
OBAW01001848
339341
Bacteroidota
GGT
Thr
>WENV180220787
OBAW01011358
343138
Bacteroidota
CCT
Arg
>WENV180220750
OBAW01003893
338486
Bacteroidota
CAT
Met
>WENV180220701
OBAW01001549
238121
Bacteroidota
CTT
Lys
>WENV180220766
OBAW01005400
338132
Bacteroidota
GCA
Cys
>WENV180220653
OBAW01000123
235165
Bacteroidota
CCA
Trp
>WENV180220700
OBAW01001532
144659
Bacteroidota
GTG
His
>WENV180220654
OBAW01000127
235180
Bacteroidota
CCA
Trp
>WENV180220808
OBAW01021236
235180
Bacteroidota
CCA
Trp
>WENV180220695
OBAW01001248
80607
Bacteroidota
GTA
Tyr
>WENV180220825
OBAW01025044
113604
Bacteroidota
>WENV180220710
OBAW01001848
80614
Bacteroidota
>WENV180220723
OBAW01002769
80614
Bacteroidota
>WENV180220760
OBAW01004761
80614
Bacteroidota
>WENV180220772
OBAW01006757
338164
Bacteroidota
TTC
Glu
>WENV180220696
OBAW01001248
338165
Bacteroidota
GGT
Thr
>WENV180220764
OBAW01005239
19317
Bacteroidota
GGA
Ser
>WENV180220699
OBAW01001478
16220
Bacteroidota
GGA
Ser
>WENV180220836
OBAW01032777
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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