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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180225246
OBBM01000043
409574
Bacillota
TGT
Thr
>WENV180225270
OBBM01000063
409574
Bacillota
TGT
Thr
>WENV180225351
OBBM01001462
409574
Bacillota
TGT
Thr
>WENV180225363
OBBM01001788
409574
Bacillota
TGT
Thr
>WENV180225392
OBBM01007747
409574
Bacillota
TGT
Thr
>WENV180225304
OBBM01000282
10560
Bacillota
GGA
Ser
>WENV180225305
OBBM01000285
118788
Bacillota
TAG
Leu
>WENV180225353
OBBM01001462
118788
Bacillota
TAG
Leu
>WENV180225365
OBBM01001788
118788
Bacillota
TAG
Leu
>WENV180225299
OBBM01000216
338208
Bacillota
>WENV180225354
OBBM01001462
338208
Bacillota
>WENV180225291
OBBM01000122
16235
Bacillota
>WENV180225348
OBBM01001462
444721
Bacillota
TCC
Gly
>WENV180225359
OBBM01001643
444721
Bacillota
TCC
Gly
>WENV180225360
OBBM01001788
444721
Bacillota
TCC
Gly
>WENV180225386
OBBM01006071
444721
Bacillota
TCC
Gly
>WENV180225243
OBBM01000043
411585
Bacillota
GCA
Cys
>WENV180225320
OBBM01000392
411585
Bacillota
GCA
Cys
>WENV180225245
OBBM01000043
313104
Bacillota
TAC
Val
>WENV180225389
OBBM01007720
314670
Bacillota
GAA
Phe
>WENV180225314
OBBM01000392
42270
Bacillota
>WENV180225318
OBBM01000392
144767
Bacillota
GTG
His
>WENV180225352
OBBM01001462
110221
Bacillota
GTA
Tyr
>WENV180225364
OBBM01001788
110221
Bacillota
GTA
Tyr
>WENV180225393
OBBM01007747
110221
Bacillota
GTA
Tyr
>WENV180225322
OBBM01000392
235288
Bacillota
TAC
Val
>WENV180225397
OBBM01008243
163753
Bacillota
TGG
Pro
>WENV180225369
OBBM01002256
319167
Bacillota
CAT
Met
>WENV180225244
OBBM01000043
144833
Bacillota
ACG
Arg
>WENV180225321
OBBM01000392
144833
Bacillota
ACG
Arg
>WENV180225272
OBBM01000070
44874
Bacillota
CAA
Leu
>WENV180225380
OBBM01003730
235292
Bacillota
CCA
Trp
>WENV180225350
OBBM01001462
199895
Bacillota
GTC
Asp
>WENV180225362
OBBM01001788
199895
Bacillota
GTC
Asp
>WENV180225388
OBBM01006071
199895
Bacillota
GTC
Asp
>WENV180225300
OBBM01000216
144762
Bacillota
TCT
Arg
>WENV180225311
OBBM01000392
144762
Bacillota
TCT
Arg
>WENV180225309
OBBM01000349
1080
Bacillota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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