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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180226538
OBBR01000057
127048
Gammaproteobacteria
CAT
Met
>WENV180226540
OBBR01000058
152135
Gammaproteobacteria
GAC
Val
>WENV180226472
OBBR01000001
145364
Gammaproteobacteria
GGG
Pro
>WENV180226491
OBBR01000009
145364
Gammaproteobacteria
GGG
Pro
>WENV180226480
OBBR01000004
342830
Gammaproteobacteria
>WENV180226515
OBBR01000023
342830
Gammaproteobacteria
>WENV180226571
OBBR01002727
342830
Gammaproteobacteria
>WENV180226550
OBBR01000070
240084
Gammaproteobacteria
GGT
Thr
>WENV180226544
OBBR01000068
144783
Gammaproteobacteria
TCT
Arg
>WENV180226539
OBBR01000057
145527
Gammaproteobacteria
TCT
Arg
>WENV180226477
OBBR01000002
240182
Gammaproteobacteria
TTT
Lys
>WENV180226485
OBBR01000007
240182
Gammaproteobacteria
TTT
Lys
>WENV180226535
OBBR01000050
240182
Gammaproteobacteria
TTT
Lys
>WENV180226579
OBBR01002938
240182
Gammaproteobacteria
TTT
Lys
>WENV180226481
OBBR01000004
145502
Gammaproteobacteria
TCT
Arg
>WENV180226479
OBBR01000003
147159
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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