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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180227218
OBBU01003854
235097
Bacteroidota
TTT
Lys
>WENV180227203
OBBU01002256
235102
Bacteroidota
CGT
Thr
>WENV180227130
OBBU01000088
243025
Bacteroidota
CAT
Met
>WENV180227092
OBBU01000005
17323
Bacteroidota
GGA
Ser
>WENV180227157
OBBU01000372
17323
Bacteroidota
GGA
Ser
>WENV180227192
OBBU01001670
436206
Bacteroidota
TTG
Gln
>WENV180227084
OBBU01000001
344692
Bacteroidota
GGT
Thr
>WENV180227319
OBBU01015005
344692
Bacteroidota
GGT
Thr
>WENV180227190
OBBU01001310
338124
Bacteroidota
CCG
Arg
>WENV180227558
OBBU01087190
126641
Bacteroidota
TAC
Val
>WENV180227213
OBBU01003180
338132
Bacteroidota
GCA
Cys
>WENV180227396
OBBU01028857
280660
Bacteroidota
CCA
Trp
>WENV180227438
OBBU01035038
301449
Bacteroidota
CGG
Pro
>WENV180227234
OBBU01004991
141414
Bacteroidota
GGG
Pro
>WENV180227232
OBBU01004755
144656
Bacteroidota
GTG
His
>WENV180227299
OBBU01012499
235207
Bacteroidota
CAT
Met
>WENV180227440
OBBU01035544
80607
Bacteroidota
GTA
Tyr
>WENV180227519
OBBU01065801
113604
Bacteroidota
>WENV180227510
OBBU01062593
154643
Bacteroidota
CAT
Met
>WENV180227654
OBBU01175179
144590
Bacteroidota
GTT
Asn
>WENV180227238
OBBU01005180
95559
Bacteroidota
TAG
Leu
>WENV180227450
OBBU01037484
144655
Bacteroidota
GGC
Ala
>WENV180227643
OBBU01174683
44852
Bacteroidota
TAA
Leu
>WENV180227364
OBBU01022591
338165
Bacteroidota
GGT
Thr
>WENV180227296
OBBU01011889
425638
Bacteroidota
CTG
Gln
>WENV180227556
OBBU01084544
19317
Bacteroidota
GGA
Ser
>WENV180227126
OBBU01000070
353927
Bacteroidota
TTC
Glu
>WENV180227091
OBBU01000004
414426
Bacteroidota
CTG
Gln
>WENV180227144
OBBU01000196
414426
Bacteroidota
CTG
Gln
>WENV180227145
OBBU01000237
56823
Bacteroidota
TGA
Ser
>WENV180227162
OBBU01000471
56823
Bacteroidota
TGA
Ser
>WENV180227577
OBBU01108858
16220
Bacteroidota
GGA
Ser
>WENV180227247
OBBU01005598
338125
Bacteroidota
CCT
Arg
>WENV180227090
OBBU01000004
313363
Bacteroidota
GAA
Phe
>WENV180227161
OBBU01000454
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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